Literature DB >> 18050393

Nematode genome evolution.

Avril Coghlan1.   

Abstract

Nematodes are the most abundant type of animal on earth, and live in hot springs, polar ice, soil, fresh and salt water, and as parasites of plants, vertebrates, insects, and other nematodes. This extraordinary ability to adapt, which hints at an underlying genetic plasticity, has long fascinated biologists. The fully sequenced genomes of Caenorhabditis elegans and Caenorhabditis briggsae, and ongoing sequencing projects for eight other nematodes, provide an exciting opportunity to investigate the genomic changes that have enabled nematodes to invade many different habitats. Analyses of the C. elegans and C. briggsae genomes suggest that these include major changes in gene content; as well as in chromosome number, structure and size. Here I discuss how the data set of ten genomes will be ideal for tackling questions about nematode evolution, as well as questions relevant to all eukaryotes.

Entities:  

Mesh:

Year:  2005        PMID: 18050393      PMCID: PMC4781476          DOI: 10.1895/wormbook.1.15.1

Source DB:  PubMed          Journal:  WormBook        ISSN: 1551-8507


  33 in total

Review 1.  Nematode phospholipid metabolism: an example of closing the genome-structure-function circle.

Authors:  Soon Goo Lee; Joseph M Jez
Journal:  Trends Parasitol       Date:  2014-03-28

Review 2.  An overview of MYC and its interactome.

Authors:  Maralice Conacci-Sorrell; Lisa McFerrin; Robert N Eisenman
Journal:  Cold Spring Harb Perspect Med       Date:  2014-01-01       Impact factor: 6.915

3.  Dynamic evolution of immune system regulators: the history of the interferon regulatory factor family.

Authors:  Jirí Nehyba; Radmila Hrdlicková; Henry R Bose
Journal:  Mol Biol Evol       Date:  2009-07-28       Impact factor: 16.240

4.  Sequence and genetic map of Meloidogyne hapla: A compact nematode genome for plant parasitism.

Authors:  Charles H Opperman; David M Bird; Valerie M Williamson; Dan S Rokhsar; Mark Burke; Jonathan Cohn; John Cromer; Steve Diener; Jim Gajan; Steve Graham; T D Houfek; Qingli Liu; Therese Mitros; Jennifer Schaff; Reenah Schaffer; Elizabeth Scholl; Bryon R Sosinski; Varghese P Thomas; Eric Windham
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-22       Impact factor: 11.205

5.  CRAC channel activity in C. elegans is mediated by Orai1 and STIM1 homologues and is essential for ovulation and fertility.

Authors:  Catherine Lorin-Nebel; Juan Xing; Xiaohui Yan; Kevin Strange
Journal:  J Physiol       Date:  2007-01-11       Impact factor: 5.182

6.  To Break or Not To Break: Sex Chromosome Hemizygosity During Meiosis in Caenorhabditis.

Authors:  Mike V Van; Braden J Larson; JoAnne Engebrecht
Journal:  Genetics       Date:  2016-09-07       Impact factor: 4.562

7.  Genome Architecture and Evolution of a Unichromosomal Asexual Nematode.

Authors:  Hélène Fradin; Karin Kiontke; Charles Zegar; Michelle Gutwein; Jessica Lucas; Mikhail Kovtun; David L Corcoran; L Ryan Baugh; David H A Fitch; Fabio Piano; Kristin C Gunsalus
Journal:  Curr Biol       Date:  2017-09-21       Impact factor: 10.834

8.  Functional genomics in Brugia malayi reveal diverse muscle nAChRs and differences between cholinergic anthelmintics.

Authors:  Saurabh Verma; Sudhanva Srinivas Kashyap; Alan Patrick Robertson; Richard John Martin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-09       Impact factor: 11.205

9.  Biochemical and functional evidence of p53 homology is inconsistent with molecular phylogenetics for distant sequences.

Authors:  Andrew D Fernandes; William R Atchley
Journal:  J Mol Evol       Date:  2008-06-17       Impact factor: 2.395

10.  Phosphoproteome of Pristionchus pacificus provides insights into architecture of signaling networks in nematode models.

Authors:  Nadine Borchert; Karsten Krug; Florian Gnad; Amit Sinha; Ralf J Sommer; Boris Macek
Journal:  Mol Cell Proteomics       Date:  2012-08-25       Impact factor: 5.911

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