Literature DB >> 18042709

Yeast gain-of-function mutations reveal structure-function relationships conserved among different subfamilies of transient receptor potential channels.

Zhenwei Su1, Xinliang Zhou, W John Haynes, Stephen H Loukin, Andriy Anishkin, Yoshiro Saimi, Ching Kung.   

Abstract

Transient receptor potential (TRP) channels found in animals, protists, and fungi are primary chemo-, thermo-, or mechanosensors. Current research emphasizes the characteristics of individual channels in each animal TRP subfamily but not the mechanisms common across subfamilies. A forward genetic screen of the TrpY1, the yeast TRP channel, recovered gain-of-function (GOF) mutations with phenotype in vivo and in vitro. Single-channel patch-clamp analyses of these GOF-mutant channels show prominent aberrations in open probability and channel kinetics. These mutations revealed functionally important aromatic amino acid residues in four locations: at the intracellular end of the fifth transmembrane helix (TM5), at both ends of TM6, and at the immediate extension of TM6. These aromatics have counterparts in most TRP subfamilies. The one in TM5 (F380L) aligns precisely with an exceptional Drosophila mutant allele (F550I) that causes constitutive activity in the canonical TRP channel, resulting in rapid and severe retinal degeneration beyond mere loss of phototaxis. Thus, this phenylalanine maintains the balance of various functional states (conformations) of a channel for insect phototransduction as well as one for fungal mechanotransduction. This residue is among a small cluster of phenylalanines found in all known subfamilies of TRP channels. This unique case illustrates that GOF mutations can reveal structure-function principles that can be generalized across different TRP subfamilies. It appears that the conserved aromatics in the four locations have conserved functions in most TRP channels. The possible mechanistic roles of these aromatics and the further use of yeast genetics to dissect TRP channels are discussed.

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Year:  2007        PMID: 18042709      PMCID: PMC2148336          DOI: 10.1073/pnas.0708584104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  39 in total

1.  Novel mechanism of massive photoreceptor degeneration caused by mutations in the trp gene of Drosophila.

Authors:  J Yoon; H C Ben-Ami; Y S Hong; S Park; L L Strong; J Bowman; C Geng; K Baek; B Minke; W L Pak
Journal:  J Neurosci       Date:  2000-01-15       Impact factor: 6.167

2.  Role of aromatic localization in the gating process of a potassium channel.

Authors:  Carmen Domene; Satyavani Vemparala; Michael L Klein; Catherine Vénien-Bryan; Declan A Doyle
Journal:  Biophys J       Date:  2005-09-16       Impact factor: 4.033

3.  Voltage sensor of Kv1.2: structural basis of electromechanical coupling.

Authors:  Stephen B Long; Ernest B Campbell; Roderick Mackinnon
Journal:  Science       Date:  2005-07-07       Impact factor: 47.728

Review 4.  Molecular mechanisms of conduction and selectivity in aquaporin water channels.

Authors:  Yi Wang; Emad Tajkhorshid
Journal:  J Nutr       Date:  2007-06       Impact factor: 4.798

5.  Crystal structure of a Kir3.1-prokaryotic Kir channel chimera.

Authors:  Motohiko Nishida; Martine Cadene; Brian T Chait; Roderick MacKinnon
Journal:  EMBO J       Date:  2007-08-16       Impact factor: 11.598

6.  Heterologously expressed fungal transient receptor potential channels retain mechanosensitivity in vitro and osmotic response in vivo.

Authors:  Xin-Liang Zhou; Steven H Loukin; Roberto Coria; Ching Kung; Yoshiro Saimi
Journal:  Eur Biophys J       Date:  2005-02-12       Impact factor: 1.733

7.  Yeast screen for constitutively active mutant G protein-activated potassium channels.

Authors:  B A Yi; Y F Lin; Y N Jan; L Y Jan
Journal:  Neuron       Date:  2001-03       Impact factor: 17.173

8.  Electrostatic contributions to indole-lipid interactions.

Authors:  Holly C Gaede; Wai-Ming Yau; Klaus Gawrisch
Journal:  J Phys Chem B       Date:  2005-07-07       Impact factor: 2.991

9.  Yeast screens show aromatic residues at the end of the sixth helix anchor transient receptor potential channel gate.

Authors:  Xinliang Zhou; Zhenwei Su; Andriy Anishkin; W John Haynes; Eric M Friske; Stephen H Loukin; Ching Kung; Yoshiro Saimi
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-18       Impact factor: 11.205

Review 10.  An introduction to TRP channels.

Authors:  I Scott Ramsey; Markus Delling; David E Clapham
Journal:  Annu Rev Physiol       Date:  2006       Impact factor: 19.318

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  23 in total

1.  Forward genetic analysis reveals multiple gating mechanisms of TRPV4.

Authors:  Stephen Loukin; Zhenwei Su; Xinliang Zhou; Ching Kung
Journal:  J Biol Chem       Date:  2010-04-27       Impact factor: 5.157

Review 2.  The use of yeast to understand TRP-channel mechanosensitivity.

Authors:  Zhenwei Su; Xinliang Zhou; Stephen H Loukin; W John Haynes; Yoshiro Saimi; Ching Kung
Journal:  Pflugers Arch       Date:  2009-05-22       Impact factor: 3.657

3.  Mechanical force and cytoplasmic Ca(2+) activate yeast TRPY1 in parallel.

Authors:  Zhenwei Su; Xinliang Zhou; Stephen H Loukin; Yoshiro Saimi; Ching Kung
Journal:  J Membr Biol       Date:  2009-02-14       Impact factor: 1.843

Review 4.  Ion channels in microbes.

Authors:  Boris Martinac; Yoshiro Saimi; Ching Kung
Journal:  Physiol Rev       Date:  2008-10       Impact factor: 37.312

5.  A yeast genetic screen reveals a critical role for the pore helix domain in TRP channel gating.

Authors:  Benjamin R Myers; Christopher J Bohlen; David Julius
Journal:  Neuron       Date:  2008-05-08       Impact factor: 17.173

6.  Progressive degeneration of dopaminergic neurons through TRP channel-induced cell death.

Authors:  Archana Nagarajan; Ye Ning; Kaja Reisner; Zafir Buraei; Jan Petter Larsen; Oliver Hobert; Maria Doitsidou
Journal:  J Neurosci       Date:  2014-04-23       Impact factor: 6.167

7.  Molecular bases of multimodal regulation of a fungal transient receptor potential (TRP) channel.

Authors:  Makoto Ihara; Shin Hamamoto; Yohei Miyanoiri; Mitsuhiro Takeda; Masatsune Kainosho; Isamu Yabe; Nobuyuki Uozumi; Atsuko Yamashita
Journal:  J Biol Chem       Date:  2013-04-03       Impact factor: 5.157

8.  Conserved gating elements in TRPC4 and TRPC5 channels.

Authors:  Andreas Beck; Tilman Speicher; Christof Stoerger; Thomas Sell; Viviane Dettmer; Siti A Jusoh; Ammar Abdulmughni; Adolfo Cavalié; Stephan E Philipp; Michael X Zhu; Volkhard Helms; Ulrich Wissenbach; Veit Flockerzi
Journal:  J Biol Chem       Date:  2013-05-15       Impact factor: 5.157

9.  Chimeras reveal a single lipid-interface residue that controls MscL channel kinetics as well as mechanosensitivity.

Authors:  Li-Min Yang; Dalian Zhong; Paul Blount
Journal:  Cell Rep       Date:  2013-02-14       Impact factor: 9.423

Review 10.  Searching for interesting channels: pairing selection and molecular evolution methods to study ion channel structure and function.

Authors:  Daniel L Minor
Journal:  Mol Biosyst       Date:  2009-06-19
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