Literature DB >> 18039886

Computing heritability and selection response from unbalanced plant breeding trials.

Hans-Peter Piepho1, Jens Möhring.   

Abstract

Heritability is often used by plant breeders and geneticists as a measure of precision of a trial or a series of trials. Its main use is for computing the response to selection. Most formulas proposed for calculating heritability implicitly assume balanced data and independent genotypic effects. Both of these assumptions are often violated in plant breeding trials. This article proposes a simulation-based approach to tackle the problem. The key idea is to directly simulate the quantity of interest, e.g., response to selection, rather than trying to approximate it using some ad hoc measure of heritability. The approach is illustrated by three examples.

Mesh:

Year:  2007        PMID: 18039886      PMCID: PMC2147938          DOI: 10.1534/genetics.107.074229

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  1 in total

1.  Joint modeling of additive and non-additive genetic line effects in single field trials.

Authors:  Helena Oakey; Arūnas Verbyla; Wayne Pitchford; Brian Cullis; Haydn Kuchel
Journal:  Theor Appl Genet       Date:  2006-08-02       Impact factor: 5.699

  1 in total
  136 in total

1.  Genome-wide association study (GWAS) of carbon isotope ratio (δ13C) in diverse soybean [Glycine max (L.) Merr.] genotypes.

Authors:  Arun Prabhu Dhanapal; Jeffery D Ray; Shardendu K Singh; Valerio Hoyos-Villegas; James R Smith; Larry C Purcell; C Andy King; Perry B Cregan; Qijian Song; Felix B Fritschi
Journal:  Theor Appl Genet       Date:  2014-11-04       Impact factor: 5.699

2.  The relationship between parental genetic or phenotypic divergence and progeny variation in the maize nested association mapping population.

Authors:  H-Y Hung; C Browne; K Guill; N Coles; M Eller; A Garcia; N Lepak; S Melia-Hancock; M Oropeza-Rosas; S Salvo; N Upadyayula; E S Buckler; S Flint-Garcia; M D McMullen; T R Rocheford; J B Holland
Journal:  Heredity (Edinb)       Date:  2011-10-26       Impact factor: 3.821

3.  Testcross performance of rye introgression lines developed by marker-assisted backcrossing using an Iranian accession as donor.

Authors:  K C Falke; Z Susić; P Wilde; H Wortmann; J Möhring; H-P Piepho; H H Geiger; T Miedaner
Journal:  Theor Appl Genet       Date:  2009-02-24       Impact factor: 5.699

4.  Establishment of introgression libraries in hybrid rye (Secale cereale L.) from an Iranian primitive accession as a new tool for rye breeding and genomics.

Authors:  K C Falke; Z Susić; B Hackauf; V Korzun; J Schondelmaier; P Wilde; P Wehling; H Wortmann; R Mank; J Rouppe van der Voort; H P Maurer; T Miedaner; H H Geiger
Journal:  Theor Appl Genet       Date:  2008-06-06       Impact factor: 5.699

5.  Multi-environment QTL mixed models for drought stress adaptation in wheat.

Authors:  Ky L Mathews; Marcos Malosetti; Scott Chapman; Lynne McIntyre; Matthew Reynolds; Ray Shorter; Fred van Eeuwijk
Journal:  Theor Appl Genet       Date:  2008-08-12       Impact factor: 5.699

6.  Integrating environmental covariates and crop modeling into the genomic selection framework to predict genotype by environment interactions.

Authors:  Nicolas Heslot; Deniz Akdemir; Mark E Sorrells; Jean-Luc Jannink
Journal:  Theor Appl Genet       Date:  2013-11-22       Impact factor: 5.699

7.  Molecular marker assisted broadening of the Central European heterotic groups in rye with Eastern European germplasm.

Authors:  Sandra Fischer; A E Melchinger; V Korzun; P Wilde; B Schmiedchen; J Möhring; H-P Piepho; B S Dhillon; T Würschum; J C Reif
Journal:  Theor Appl Genet       Date:  2010-01       Impact factor: 5.699

8.  REML approach for adjusting the Fusarium head blight rating to a phenological date in inoculated selection experiments of wheat.

Authors:  K Emrich; F Wilde; T Miedaner; H P Piepho
Journal:  Theor Appl Genet       Date:  2008-04-05       Impact factor: 5.699

9.  Heritability and identification of QTLs and underlying candidate genes associated with the architecture of the grapevine cluster (Vitis vinifera L.).

Authors:  J Correa; M Mamani; C Muñoz-Espinoza; D Laborie; C Muñoz; M Pinto; P Hinrichsen
Journal:  Theor Appl Genet       Date:  2014-02-21       Impact factor: 5.699

10.  Unraveling epistasis with triple testcross progenies of near-isogenic lines.

Authors:  Jochen C Reif; Barbara Kusterer; Hans-Peter Piepho; Rhonda C Meyer; Thomas Altmann; Chris C Schön; Albrecht E Melchinger
Journal:  Genetics       Date:  2008-11-03       Impact factor: 4.562

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