Literature DB >> 18036332

Interacting proteins Rtt109 and Vps75 affect the efficiency of non-homologous end-joining in Saccharomyces cerevisiae.

Matthew Jessulat1, Md Alamgir, Hamid Salsali, Jack Greenblatt, Jianhua Xu, Ashkan Golshani.   

Abstract

One of the key pathways for DNA double-stranded break (DSB) repair is the non-homologous end-joining (NHEJ) pathway, which directly re-ligates two broken ends of DNA. Using a plasmid repair assay screen, we identified that the deletion strain for RTT109 had a reduced efficiency for NHEJ in yeast. This deletion strain also had a reduced efficiency to repair induced chromosomal DSBs in vivo. Tandem-affinity purification of Rtt109 recovered Vps75 as a physical interacting protein. Deletion of VPS75 was also shown to have an effect on the efficiency of NHEJ in both the plasmid repair and the chromosomal repair assays. In addition, deletion mutants for both RTT109 and VPS75 showed hypersensitivity to different DNA damaging agents. Our genetic interaction analysis supports a role for RTT109 in DNA damage repair. We propose that one function of the Rtt109-Vps75 interacting protein pair is to affect the efficiency of NHEJ in yeast. Vps75 but not Rtt109 also seem to have an effect on the efficiency of DSB repair using homologous recombination.

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Year:  2007        PMID: 18036332     DOI: 10.1016/j.abb.2007.11.001

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  23 in total

1.  An rtt109-independent role for vps75 in transcription-associated nucleosome dynamics.

Authors:  Luke A Selth; Yahli Lorch; Maria T Ocampo-Hafalla; Richard Mitter; Michael Shales; Nevan J Krogan; Roger D Kornberg; Jesper Q Svejstrup
Journal:  Mol Cell Biol       Date:  2009-05-26       Impact factor: 4.272

2.  Probing nucleosome function: a highly versatile library of synthetic histone H3 and H4 mutants.

Authors:  Junbiao Dai; Edel M Hyland; Daniel S Yuan; Hailiang Huang; Joel S Bader; Jef D Boeke
Journal:  Cell       Date:  2008-09-19       Impact factor: 41.582

3.  Bioinformatic identification of genes suppressing genome instability.

Authors:  Christopher D Putnam; Stephanie R Allen-Soltero; Sandra L Martinez; Jason E Chan; Tikvah K Hayes; Richard D Kolodner
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-05       Impact factor: 11.205

Review 4.  The histone shuffle: histone chaperones in an energetic dance.

Authors:  Chandrima Das; Jessica K Tyler; Mair E A Churchill
Journal:  Trends Biochem Sci       Date:  2010-05-03       Impact factor: 13.807

5.  Histone chaperones, histone acetylation, and the fluidity of the chromogenome.

Authors:  Jeffrey C Hansen; Jennifer K Nyborg; Karolin Luger; Laurie A Stargell
Journal:  J Cell Physiol       Date:  2010-08       Impact factor: 6.384

6.  Spindle Checkpoint Factors Bub1 and Bub2 Promote DNA Double-Strand Break Repair by Nonhomologous End Joining.

Authors:  Matthew Jessulat; Ramy H Malty; Diem-Hang Nguyen-Tran; Viktor Deineko; Hiroyuki Aoki; James Vlasblom; Katayoun Omidi; Ke Jin; Zoran Minic; Mohsen Hooshyar; Daniel Burnside; Bahram Samanfar; Sadhna Phanse; Tanya Freywald; Bhanu Prasad; Zhaolei Zhang; Franco Vizeacoumar; Nevan J Krogan; Andrew Freywald; Ashkan Golshani; Mohan Babu
Journal:  Mol Cell Biol       Date:  2015-05-11       Impact factor: 4.272

7.  Pneumocystis carinii expresses an active Rtt109 histone acetyltransferase.

Authors:  Theodore J Kottom; Junhong Han; Zhiguo Zhang; Andrew H Limper
Journal:  Am J Respir Cell Mol Biol       Date:  2010-07-23       Impact factor: 6.914

8.  Inhibition of proteasomal degradation of rpn4 impairs nonhomologous end-joining repair of DNA double-strand breaks.

Authors:  Donghong Ju; Xiaogang Wang; Seung-Wook Ha; Jiejun Fu; Youming Xie
Journal:  PLoS One       Date:  2010-04-01       Impact factor: 3.240

9.  Chemical-genetic profile analysis of five inhibitory compounds in yeast.

Authors:  Md Alamgir; Veronika Erukova; Matthew Jessulat; Ali Azizi; Ashkan Golshani
Journal:  BMC Chem Biol       Date:  2010-08-06

10.  HST3/HST4-dependent deacetylation of lysine 56 of histone H3 in silent chromatin.

Authors:  Bo Yang; Andrew Miller; Ann L Kirchmaier
Journal:  Mol Biol Cell       Date:  2008-09-17       Impact factor: 4.138

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