Literature DB >> 18031267

Probing the mechanical stability of proteins using the atomic force microscope.

D J Brockwell1.   

Abstract

The mechanical strength of single protein molecules can be investigated by using the atomic force microscope. By applying this technique to a wide range of proteins, it appears that the type of secondary structure and its orientation relative to the extension points are important determinants of mechanical strength. Unlike chemical denaturants, force acts locally and the mechanical strength of a protein may thus appear to be mechanically weak or strong by simply varying the region of the landscape through which the protein is unfolded. Similarly, the effect of ligand binding on the mechanical resistance of a protein may also depend on the relative locations of the binding site and force application. Mechanical deformation may thus facilitate the degradation or remodelling of thermodynamically stable proteins and their complexes in vivo.

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Year:  2007        PMID: 18031267     DOI: 10.1042/BST0351564

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  11 in total

1.  Prying open single GroES ring complexes by force reveals cooperativity across domains.

Authors:  Akiko Ikeda-Kobayashi; Yukinori Taniguchi; David J Brockwell; Emanuele Paci; Masaru Kawakami
Journal:  Biophys J       Date:  2012-04-18       Impact factor: 4.033

2.  Functional modes and residue flexibility control the anisotropic response of guanylate kinase to mechanical stress.

Authors:  Sophie Sacquin-Mora; Olivier Delalande; Marc Baaden
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

3.  The removal of a disulfide bridge in CotA-laccase changes the slower motion dynamics involved in copper binding but has no effect on the thermodynamic stability.

Authors:  André T Fernandes; Manuela M Pereira; Catarina S Silva; Peter F Lindley; Isabel Bento; Eduardo Pinho Melo; Lígia O Martins
Journal:  J Biol Inorg Chem       Date:  2011-03-03       Impact factor: 3.358

4.  Mechanical unfolding of acylphosphatase studied by single-molecule force spectroscopy and MD simulations.

Authors:  Gali Arad-Haase; Silvia G Chuartzman; Shlomi Dagan; Reinat Nevo; Maksim Kouza; Binh Khanh Mai; Hung Tien Nguyen; Mai Suan Li; Ziv Reich
Journal:  Biophys J       Date:  2010-07-07       Impact factor: 4.033

5.  A force-activated trip switch triggers rapid dissociation of a colicin from its immunity protein.

Authors:  Oliver E Farrance; Eleanore Hann; Renata Kaminska; Nicholas G Housden; Sasha R Derrington; Colin Kleanthous; Sheena E Radford; David J Brockwell
Journal:  PLoS Biol       Date:  2013-02-19       Impact factor: 8.029

6.  Response of a concentrated monoclonal antibody formulation to high shear.

Authors:  Jared S Bee; Jennifer L Stevenson; Bhavya Mehta; Juraj Svitel; Joey Pollastrini; Robert Platz; Erwin Freund; John F Carpenter; Theodore W Randolph
Journal:  Biotechnol Bioeng       Date:  2009-08-01       Impact factor: 4.530

7.  Recent applications of boxed molecular dynamics: a simple multiscale technique for atomistic simulations.

Authors:  Jonathan Booth; Saulo Vazquez; Emilio Martinez-Nunez; Alison Marks; Jeff Rodgers; David R Glowacki; Dmitrii V Shalashilin
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2014-08-06       Impact factor: 4.226

8.  Identification of a mechanical rheostat in the hydrophobic core of protein L.

Authors:  David P Sadler; Eva Petrik; Yukinori Taniguchi; James R Pullen; Masaru Kawakami; Sheena E Radford; David J Brockwell
Journal:  J Mol Biol       Date:  2009-08-13       Impact factor: 5.469

Review 9.  Folding scene investigation: membrane proteins.

Authors:  Paula J Booth; Paul Curnow
Journal:  Curr Opin Struct Biol       Date:  2009-01-20       Impact factor: 6.809

10.  Collapse of a long axis: single-molecule Förster resonance energy transfer and serpin equilibrium unfolding.

Authors:  Lu Liu; Michael Werner; Anne Gershenson
Journal:  Biochemistry       Date:  2014-05-01       Impact factor: 3.162

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