Literature DB >> 18024895

Effects of point mutations in the cytidine deaminase domains of APOBEC3B on replication and hypermutation of hepatitis B virus in vitro.

Marianne Bonvin1, Jobst Greeve.   

Abstract

APOBEC3 cytidine deaminases hypermutate hepatitis B virus (HBV) and inhibit its replication in vitro. Whether this inhibition is due to the generation of hypermutations or to an alternative mechanism is controversial. A series of APOBEC3B (A3B) point mutants was analysed in vitro for hypermutational activity on HBV DNA and for inhibitory effects on HBV replication. Point mutations inactivating the carboxy-terminal deaminase domain abolished the hypermutational activity and reduced the inhibitory activity on HBV replication to approximately 40 %. In contrast, the point mutation H66R, inactivating the amino-terminal deaminase domain, did not affect hypermutations, but reduced the inhibition activity to 63 %, whilst the mutant C97S had no effect in either assay. Thus, only the carboxy-terminal deaminase domain of A3B catalyses cytidine deaminations leading to HBV hypermutations, but induction of hypermutations is not sufficient for full inhibition of HBV replication, for which both domains of A3B must be intact.

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Year:  2007        PMID: 18024895     DOI: 10.1099/vir.0.83149-0

Source DB:  PubMed          Journal:  J Gen Virol        ISSN: 0022-1317            Impact factor:   3.891


  19 in total

1.  Heat shock proteins stimulate APOBEC-3-mediated cytidine deamination in the hepatitis B virus.

Authors:  Zhigang Chen; Thomas L Eggerman; Alexander V Bocharov; Irina N Baranova; Tatyana G Vishnyakova; Roger Kurlander; Amy P Patterson
Journal:  J Biol Chem       Date:  2017-06-21       Impact factor: 5.157

2.  Nuclear Magnetic Resonance Structure of the APOBEC3B Catalytic Domain: Structural Basis for Substrate Binding and DNA Deaminase Activity.

Authors:  In-Ja L Byeon; Chang-Hyeock Byeon; Tiyun Wu; Mithun Mitra; Dustin Singer; Judith G Levin; Angela M Gronenborn
Journal:  Biochemistry       Date:  2016-05-19       Impact factor: 3.162

3.  Differential virus restriction patterns of rhesus macaque and human APOBEC3A: implications for lentivirus evolution.

Authors:  Kimberly Schmitt; Kejun Guo; Malinda Algaier; Autumn Ruiz; Fang Cheng; Jianming Qiu; Silke Wissing; Mario L Santiago; Edward B Stephens
Journal:  Virology       Date:  2011-08-25       Impact factor: 3.616

4.  Biochemical analysis of hypermutation by the deoxycytidine deaminase APOBEC3A.

Authors:  Robin P Love; Huixin Xu; Linda Chelico
Journal:  J Biol Chem       Date:  2012-07-20       Impact factor: 5.157

5.  Structural Analysis of the Active Site and DNA Binding of Human Cytidine Deaminase APOBEC3B.

Authors:  Shurong Hou; Tania V Silvas; Florian Leidner; Ellen A Nalivaika; Hiroshi Matsuo; Nese Kurt Yilmaz; Celia A Schiffer
Journal:  J Chem Theory Comput       Date:  2018-12-11       Impact factor: 6.006

6.  Characterization of the Catalytic Domain of Human APOBEC3B and the Critical Structural Role for a Conserved Methionine.

Authors:  Sachini U Siriwardena; Thisari A Guruge; Ashok S Bhagwat
Journal:  J Mol Biol       Date:  2015-08-14       Impact factor: 5.469

7.  Antiviral Mechanism and Biochemical Basis of the Human APOBEC3 Family.

Authors:  Mayumi Imahashi; Masaaki Nakashima; Yasumasa Iwatani
Journal:  Front Microbiol       Date:  2012-07-09       Impact factor: 5.640

Review 8.  Associations between activation-induced cytidine deaminase/apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like cytidine deaminase expression, hepatitis B virus (HBV) replication and HBV-associated liver disease (Review).

Authors:  Xiuting He; Jie Li; Jing Wu; Manli Zhang; Pujun Gao
Journal:  Mol Med Rep       Date:  2015-09-10       Impact factor: 2.952

9.  APOBEC3B can impair genomic stability by inducing base substitutions in genomic DNA in human cells.

Authors:  Masanobu Shinohara; Katsuhiro Io; Keisuke Shindo; Masashi Matsui; Takashi Sakamoto; Kohei Tada; Masayuki Kobayashi; Norimitsu Kadowaki; Akifumi Takaori-Kondo
Journal:  Sci Rep       Date:  2012-11-13       Impact factor: 4.379

10.  Molecular basis of the attenuated phenotype of human APOBEC3B DNA mutator enzyme.

Authors:  Vincent Caval; Mohamed S Bouzidi; Rodolphe Suspène; Hélène Laude; Marie-Charlotte Dumargne; Anu Bashamboo; Thomas Krey; Jean-Pierre Vartanian; Simon Wain-Hobson
Journal:  Nucleic Acids Res       Date:  2015-09-17       Impact factor: 16.971

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