Literature DB >> 18024232

The PcG gene Sfmbt2 is paternally expressed in extraembryonic tissues.

Anastasia Kuzmin1, Zhiming Han, Michael C Golding, Mellissa R W Mann, Keith E Latham, Susannah Varmuza.   

Abstract

Genomic imprinting has dramatic effects on placental development, as has been clearly observed in interspecific hybrid, somatic cell nuclear transfer, and uniparental embryos. In fact, the earliest defects in uniparental embryos are evident first in the extraembryonic trophoblast. We performed a microarray comparison of gynogenetic and androgenetic mouse blastocysts, which are predisposed to placental pathologies, to identify imprinted genes. In addition to identifying a large number of known imprinted genes, we discovered that the Polycomb group (PcG) gene Sfmbt2 is imprinted. Sfmbt2 is expressed preferentially from the paternal allele in early embryos, and in later stage extraembryonic tissues. A CpG island spanning the transcriptional start site is differentially methylated on the maternal allele in e14.5 placenta. Sfmbt2 is located on proximal chromosome 2, in a region known to be imprinted, but for which no genes had been identified until now. This possibly identifies a new imprinted domain within the murine genome. We further demonstrate that murine SFMBT2 protein interacts with the transcription factor YY1, similar to the Drosophila PHO-RC.

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Year:  2007        PMID: 18024232      PMCID: PMC2220043          DOI: 10.1016/j.modgep.2007.09.005

Source DB:  PubMed          Journal:  Gene Expr Patterns        ISSN: 1567-133X            Impact factor:   1.224


  42 in total

Review 1.  Study of stem cell function using microarray experiments.

Authors:  Carolina Perez-Iratxeta; Gareth Palidwor; Christopher J Porter; Neal A Sanche; Matthew R Huska; Brian P Suomela; Enrique M Muro; Paul M Krzyzanowski; Evan Hughes; Pearl A Campbell; Michael A Rudnicki; Miguel A Andrade
Journal:  FEBS Lett       Date:  2005-03-21       Impact factor: 4.124

Review 2.  Imprinted genes in the placenta--a review.

Authors:  P M Coan; G J Burton; A C Ferguson-Smith
Journal:  Placenta       Date:  2005-04       Impact factor: 3.481

Review 3.  Co-evolution of X-chromosome inactivation and imprinting in mammals.

Authors:  Wolf Reik; Annabelle Lewis
Journal:  Nat Rev Genet       Date:  2005-05       Impact factor: 53.242

Review 4.  Genomic imprinting in the placenta.

Authors:  A Wagschal; R Feil
Journal:  Cytogenet Genome Res       Date:  2006       Impact factor: 1.636

5.  Expression profiling of uniparental mouse embryos is inefficient in identifying novel imprinted genes.

Authors:  Nico Ruf; Ulrich Dünzinger; Anja Brinckmann; Thomas Haaf; Peter Nürnberg; Ulrich Zechner
Journal:  Genomics       Date:  2006-02-07       Impact factor: 5.736

6.  L3mbtl, the mouse orthologue of the imprinted L3MBTL, displays a complex pattern of alternative splicing and escapes genomic imprinting.

Authors:  Juan Li; Anthony J Bench; Sandie Piltz; George Vassiliou; E Joanna Baxter; Anne C Ferguson-Smith; Anthony R Green
Journal:  Genomics       Date:  2005-10       Impact factor: 5.736

7.  Targeted disruption of mouse Yin Yang 1 transcription factor results in peri-implantation lethality.

Authors:  M E Donohoe; X Zhang; L McGinnis; J Biggers; E Li; Y Shi
Journal:  Mol Cell Biol       Date:  1999-10       Impact factor: 4.272

8.  A Polycomb group protein complex with sequence-specific DNA-binding and selective methyl-lysine-binding activities.

Authors:  Tetyana Klymenko; Bernadett Papp; Wolfgang Fischle; Thomas Köcher; Malgorzata Schelder; Cornelia Fritsch; Brigitte Wild; Matthias Wilm; Jürg Müller
Journal:  Genes Dev       Date:  2006-04-17       Impact factor: 11.361

9.  Mutations in NALP7 cause recurrent hydatidiform moles and reproductive wastage in humans.

Authors:  Sharlene Murdoch; Ugljesa Djuric; Batool Mazhar; Muheiddine Seoud; Rabia Khan; Rork Kuick; Rashmi Bagga; Renate Kircheisen; Asangla Ao; Bhawna Ratti; Samir Hanash; Guy A Rouleau; Rima Slim
Journal:  Nat Genet       Date:  2006-02-05       Impact factor: 38.330

10.  Epigenetics and imprinting of the trophoblast -- a workshop report.

Authors:  A C Ferguson-Smith; T Moore; J Detmar; A Lewis; M Hemberger; H Jammes; G Kelsey; C T Roberts; H Jones; M Constancia
Journal:  Placenta       Date:  2006-04-03       Impact factor: 3.481

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  32 in total

1.  Recent acquisition of imprinting at the rodent Sfmbt2 locus correlates with insertion of a large block of miRNAs.

Authors:  Qianwei Wang; Jacqueline Chow; Jenny Hong; Anne Ferguson Smith; Carol Moreno; Peter Seaby; Paul Vrana; Kamelia Miri; Joon Tak; Eu Ddeum Chung; Gabriela Mastromonaco; Isabella Caniggia; Susannah Varmuza
Journal:  BMC Genomics       Date:  2011-04-21       Impact factor: 3.969

2.  Characterization of conserved and nonconserved imprinted genes in swine.

Authors:  Steve R Bischoff; Shengdar Tsai; Nicholas Hardison; Alison A Motsinger-Reif; Brad A Freking; Dan Nonneman; Gary Rohrer; Jorge A Piedrahita
Journal:  Biol Reprod       Date:  2009-07-01       Impact factor: 4.285

3.  A survey for novel imprinted genes in the mouse placenta by mRNA-seq.

Authors:  Xu Wang; Paul D Soloway; Andrew G Clark
Journal:  Genetics       Date:  2011-07-29       Impact factor: 4.562

4.  Genome-wide impact of a recently expanded microRNA cluster in mouse.

Authors:  Grace X Y Zheng; Arvind Ravi; Genevieve M Gould; Christopher B Burge; Phillip A Sharp
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-12       Impact factor: 11.205

Review 5.  Chromatin regulation: how complex does it get?

Authors:  Karin Meier; Alexander Brehm
Journal:  Epigenetics       Date:  2014-11       Impact factor: 4.528

6.  Aberrant imprinting in mouse trophoblast stem cells established from somatic cell nuclear transfer-derived embryos.

Authors:  Michiko Hirose; Masashi Hada; Satoshi Kamimura; Shogo Matoba; Arata Honda; Kaori Motomura; Narumi Ogonuki; Hossam H Shawki; Kimiko Inoue; Satoru Takahashi; Atsuo Ogura
Journal:  Epigenetics       Date:  2018-08-23       Impact factor: 4.528

Review 7.  What does genetics tell us about imprinting and the placenta connection?

Authors:  Susannah Varmuza; Kamelia Miri
Journal:  Cell Mol Life Sci       Date:  2014-09-07       Impact factor: 9.261

Review 8.  Using next-generation RNA sequencing to identify imprinted genes.

Authors:  X Wang; A G Clark
Journal:  Heredity (Edinb)       Date:  2014-03-12       Impact factor: 3.821

9.  Regulation of DU145 prostate cancer cell growth by Scm-like with four mbt domains 2.

Authors:  Kwanghyun Lee; Wonho Na; Je-Heon Maeng; Hongjin Wu; Bong-Gun Ju
Journal:  J Biosci       Date:  2013-03       Impact factor: 1.826

10.  Imprinting of the polycomb group gene MEDEA serves as a ploidy sensor in Arabidopsis.

Authors:  Aleksandra Erilova; Lynette Brownfield; Vivien Exner; Marisa Rosa; David Twell; Ortrun Mittelsten Scheid; Lars Hennig; Claudia Köhler
Journal:  PLoS Genet       Date:  2009-09-25       Impact factor: 5.917

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