Literature DB >> 18021287

The transcriptome of the implant biopsy identifies donor kidneys at increased risk of delayed graft function.

T F Mueller1, J Reeve, G S Jhangri, M Mengel, Z Jacaj, L Cairo, M Obeidat, G Todd, R Moore, K S Famulski, J Cruz, D Wishart, C Meng, B Sis, K Solez, B Kaplan, P F Halloran.   

Abstract

Improved assessment of donor organ quality at time of transplantation would help in management of potentially usable organs. The transcriptome might correlate with risk of delayed graft function (DGF) better than conventional risk factors. Microarray results of 87 consecutive implantation biopsies taken postreperfusion in 42 deceased (DD) and 45 living (LD) donor kidneys were compared to clinical and histopathology-based scores. Unsupervised analysis separated the 87 kidneys into three groups: LD, DD1 and DD2. Kidneys in DD2 had a greater incidence of DGF (38.1 vs. 9.5%, p < 0.05) than those in DD1. Clinical and histopathological risk scores did not discriminate DD1 from DD2. A total of 1051 transcripts were differentially expressed between DD1 and DD2, but no transcripts separated DGF from immediate graft function (adjusted p < 0.01). Principal components analysis revealed a continuum from LD to DD1 to DD2, i.e. from best to poorest functioning kidneys. Within DD kidneys, the odds ratio for DGF was significantly increased with a transcriptome-based score and recipient age (p < 0.03) but not with clinical or histopathologic scores. The transcriptome reflects kidney quality and susceptibility to DGF better than available clinical and histopathological scoring systems.

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Year:  2007        PMID: 18021287     DOI: 10.1111/j.1600-6143.2007.02032.x

Source DB:  PubMed          Journal:  Am J Transplant        ISSN: 1600-6135            Impact factor:   8.086


  36 in total

Review 1.  Assessment of kidney organ quality and prediction of outcome at time of transplantation.

Authors:  Thomas F Mueller; Kim Solez; Valeria Mas
Journal:  Semin Immunopathol       Date:  2011-01-28       Impact factor: 9.623

Review 2.  Molecular diagnostics in transplantation.

Authors:  Maarten Naesens; Minnie M Sarwal
Journal:  Nat Rev Nephrol       Date:  2010-08-24       Impact factor: 28.314

3.  Low-density array PCR analysis of reperfusion biopsies: an adjunct to histological analysis.

Authors:  Paolo Cravedi; Umberto Maggiore; Roslyn B Mannon
Journal:  Nephrol Dial Transplant       Date:  2010-05-26       Impact factor: 5.992

Review 4.  Integrative analysis of -omics data and histologic scoring in renal disease and transplantation: renal histogenomics.

Authors:  Paul Perco; Rainer Oberbauer
Journal:  Semin Nephrol       Date:  2010-09       Impact factor: 5.299

5.  Reassessing the Significance of Intimal Arteritis in Kidney Transplant Biopsy Specimens.

Authors:  Israel D R Salazar; Maribel Merino López; Jessica Chang; Philip F Halloran
Journal:  J Am Soc Nephrol       Date:  2015-04-27       Impact factor: 10.121

Review 6.  Advances in Detection of Kidney Transplant Injury.

Authors:  Sanjeeva Herath; Jonathan Erlich; Amy Y M Au; Zoltán H Endre
Journal:  Mol Diagn Ther       Date:  2019-06       Impact factor: 4.074

Review 7.  Delayed graft function in the kidney transplant.

Authors:  A Siedlecki; W Irish; D C Brennan
Journal:  Am J Transplant       Date:  2011-09-19       Impact factor: 8.086

8.  Tubular expression of KIM-1 does not predict delayed function after transplantation.

Authors:  Bernd Schröppel; Bernd Krüger; Liron Walsh; Melissa Yeung; Shay Harris; Krista Garrison; Jonathan Himmelfarb; Susan M Lerner; Jonathan S Bromberg; Ping L Zhang; Joseph V Bonventre; Zhu Wang; Alton B Farris; Robert B Colvin; Barbara T Murphy; John P Vella
Journal:  J Am Soc Nephrol       Date:  2009-12-17       Impact factor: 10.121

9.  Expression of complement components differs between kidney allografts from living and deceased donors.

Authors:  Maarten Naesens; Li Li; Lihua Ying; Poonam Sansanwal; Tara K Sigdel; Szu-Chuan Hsieh; Neeraja Kambham; Evelyne Lerut; Oscar Salvatierra; Atul J Butte; Minnie M Sarwal
Journal:  J Am Soc Nephrol       Date:  2009-05-14       Impact factor: 10.121

10.  "Nature versus nurture" study of deceased-donor pairs in kidney transplantation.

Authors:  Daniel W Louvar; Na Li; Jon Snyder; Yi Peng; Bertram L Kasiske; Ajay K Israni
Journal:  J Am Soc Nephrol       Date:  2009-04-23       Impact factor: 10.121

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