Literature DB >> 18021258

Chromatin movement visualized with photoactivable GFP-labeled histone H4.

Karien Wiesmeijer1, Ilke M Krouwels, Hans J Tanke, Roeland W Dirks.   

Abstract

The cell nucleus is highly organized with chromosomes occupying discrete, partially overlapping territories, and proteins that localize to specific nuclear compartments. This spatial organization of the nucleus is considered to be dynamic in response to environmental and cellular conditions to support changes in transcriptional programs. Chromatin, however, is relatively immobile when analyzed in living cells and shows a constrained Brownian type of movement. A possible explanation for this relative immobility is that chromatin interacts with a nuclear matrix structure and/or with nuclear compartments. Here, we explore the use of photoactivatable GFP fused to histone H4 as a potential tool to analyze the mobility of chromatin at various nuclear compartments. Selective photoactivation of photoactivatable-GFP at defined nuclear regions was achieved by two-photon excitation with 820 nm light. Nuclear speckles, which are considered storage sites of splicing factors, were visualized by coexpression of a fluorescent protein fused to splicing factor SF2/ASF. The results reveal a constrained chromatin motion, which is not affected by transcriptional inhibition, and suggests an intimate interaction of chromatin with speckles.

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Year:  2007        PMID: 18021258     DOI: 10.1111/j.1432-0436.2007.00234.x

Source DB:  PubMed          Journal:  Differentiation        ISSN: 0301-4681            Impact factor:   3.880


  17 in total

1.  Live cell microscopy analysis of radiation-induced DNA double-strand break motion.

Authors:  B Jakob; J Splinter; M Durante; G Taucher-Scholz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-12       Impact factor: 11.205

2.  Micron-scale coherence in interphase chromatin dynamics.

Authors:  Alexandra Zidovska; David A Weitz; Timothy J Mitchison
Journal:  Proc Natl Acad Sci U S A       Date:  2013-09-09       Impact factor: 11.205

3.  4D chromatin dynamics in cycling cells: Theodor Boveri's hypotheses revisited.

Authors:  Hilmar Strickfaden; Andreas Zunhammer; Silvana van Koningsbruggen; Daniela Köhler; Thomas Cremer
Journal:  Nucleus       Date:  2010-04-06       Impact factor: 4.197

4.  Nanoscale histone localization in live cells reveals reduced chromatin mobility in response to DNA damage.

Authors:  Jing Liu; Pierre-Alexandre Vidi; Sophie A Lelièvre; Joseph M K Irudayaraj
Journal:  J Cell Sci       Date:  2014-12-12       Impact factor: 5.285

Review 5.  The self-stirred genome: large-scale chromatin dynamics, its biophysical origins and implications.

Authors:  Alexandra Zidovska
Journal:  Curr Opin Genet Dev       Date:  2020-06-01       Impact factor: 5.578

6.  DNA damage reduces heterogeneity and coherence of chromatin motions.

Authors:  Maëlle Locatelli; Josh Lawrimore; Hua Lin; Sarvath Sanaullah; Clayton Seitz; Dave Segall; Paul Kefer; Naike Salvador Moreno; Benton Lietz; Rebecca Anderson; Julia Holmes; Chongli Yuan; George Holzwarth; Kerry S Bloom; Jing Liu; Keith Bonin; Pierre-Alexandre Vidi
Journal:  Proc Natl Acad Sci U S A       Date:  2022-07-12       Impact factor: 12.779

7.  Chromatin dynamics is correlated with replication timing.

Authors:  Artem Pliss; Kishore Malyavantham; Sambit Bhattacharya; Michael Zeitz; Ronald Berezney
Journal:  Chromosoma       Date:  2009-03-19       Impact factor: 4.316

8.  Stable morphology, but dynamic internal reorganisation, of interphase human chromosomes in living cells.

Authors:  Iris Müller; Shelagh Boyle; Robert H Singer; Wendy A Bickmore; Jonathan R Chubb
Journal:  PLoS One       Date:  2010-07-13       Impact factor: 3.240

9.  Telomeric DNA mediates de novo PML body formation.

Authors:  Anneke K Brouwer; Joost Schimmel; Joop C A G Wiegant; Alfred C O Vertegaal; Hans J Tanke; Roeland W Dirks
Journal:  Mol Biol Cell       Date:  2009-09-30       Impact factor: 4.138

10.  Patterned two-photon photoactivation illuminates spatial reorganization in live cells.

Authors:  Adam W Smith; Alexander A Smoligovets; Jay T Groves
Journal:  J Phys Chem A       Date:  2011-03-10       Impact factor: 2.781

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