Literature DB >> 18007052

Purification, crystallization and preliminary X-ray crystallographic analysis of ST1022, a putative member of the Lrp/AsnC family of transcriptional regulators isolated from Sulfolobus tokodaii strain 7.

Noboru Nakano1, Thirumananseri Kumarevel, Emiko Matsunaga, Akeo Shinkai, Seiki Kuramitsu, Shigeyuki Yokoyama.   

Abstract

The Lrp/AsnC family of transcriptional regulators, also known as feast/famine transcriptional regulators, are widely distributed among bacteria and archaea. This family of proteins are likely to be involved in cellular metabolism, with exogenous amino acids functioning as effectors. Here, the crystallization and preliminary X-ray diffraction analysis of ST1022, a member of the Lrp/AsnC family of proteins, is reported with and without exogenous glutamine as the effector molecule. The crystals of native ST1022 and of the putative complex belong to the tetragonal space group I422, with unit-cell parameters a = b = 103.771, c = 73.297 A and a = b = 103.846, c = 73.992 A, respectively. Preliminary X-ray diffraction data analysis and molecular-replacement solution revealed the presence of one monomer per asymmetric unit.

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Year:  2007        PMID: 18007052      PMCID: PMC2339745          DOI: 10.1107/S1744309107049962

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  20 in total

Review 1.  Mechanism and regulation of transcription in archaea.

Authors:  S D Bell; S P Jackson
Journal:  Curr Opin Microbiol       Date:  2001-04       Impact factor: 7.934

2.  Leucine-regulated self-association of leucine-responsive regulatory protein (Lrp) from Escherichia coli.

Authors:  S Chen; M H Rosner; J M Calvo
Journal:  J Mol Biol       Date:  2001-09-28       Impact factor: 5.469

Review 3.  The Lrp family of transcriptional regulators.

Authors:  Arie B Brinkman; Thijs J G Ettema; Willem M de Vos; John van der Oost
Journal:  Mol Microbiol       Date:  2003-04       Impact factor: 3.501

Review 4.  Transcriptional regulation in Archaea.

Authors:  Mohamed Ouhammouch
Journal:  Curr Opin Genet Dev       Date:  2004-04       Impact factor: 5.578

5.  The archaeal feast/famine regulatory protein: potential roles of its assembly forms for regulating transcription.

Authors:  Hideaki Koike; Sanae A Ishijima; Lester Clowney; Masashi Suzuki
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-19       Impact factor: 11.205

6.  Free R value: a novel statistical quantity for assessing the accuracy of crystal structures.

Authors:  A T Brünger
Journal:  Nature       Date:  1992-01-30       Impact factor: 49.962

7.  Multiple sequence alignment with hierarchical clustering.

Authors:  F Corpet
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

8.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

9.  An Lrp-like transcriptional regulator from the archaeon Pyrococcus furiosus is negatively autoregulated.

Authors:  A B Brinkman; I Dahlke; J E Tuininga; T Lammers; V Dumay; E de Heus; J H Lebbink; M Thomm; W M de Vos; J van Der Oost
Journal:  J Biol Chem       Date:  2000-12-08       Impact factor: 5.157

10.  Leucine-induced dissociation of Escherichia coli Lrp hexadecamers to octamers.

Authors:  Shaolin Chen; Joseph M Calvo
Journal:  J Mol Biol       Date:  2002-05-10       Impact factor: 5.469

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  4 in total

Review 1.  Host and viral transcriptional regulators in Sulfolobus: an overview.

Authors:  Patrizia Contursi; Salvatore Fusco; Danila Limauro; Gabriella Fiorentino
Journal:  Extremophiles       Date:  2013-10-02       Impact factor: 2.395

2.  Cloning, overexpression, purification and preliminary X-ray analysis of a feast/famine regulatory protein (Rv2779c) from Mycobacterium tuberculosis H37Rv.

Authors:  Abhishek Dey; Ravishankar Ramachandran
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2013-12-24       Impact factor: 1.056

3.  The Lrp family of transcription regulators in archaea.

Authors:  Eveline Peeters; Daniel Charlier
Journal:  Archaea       Date:  2010-11-30       Impact factor: 3.273

4.  Crystal structure of glutamine receptor protein from Sulfolobus tokodaii strain 7 in complex with its effector L-glutamine: implications of effector binding in molecular association and DNA binding.

Authors:  Thirumananseri Kumarevel; Noboru Nakano; Karthe Ponnuraj; Subash C B Gopinath; Keiko Sakamoto; Akeo Shinkai; Penmetcha K R Kumar; Shigeyuki Yokoyama
Journal:  Nucleic Acids Res       Date:  2008-07-24       Impact factor: 16.971

  4 in total

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