Literature DB >> 18007050

Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of universal stress protein F (YnaF) from Salmonella typhimurium.

Someswar Rao Sagurthi1, Rashmi Rekha Panigrahi, Giri Gowda, H S Savithri, M R N Murthy.   

Abstract

The universal stress protein UspF (YnaF) is a small cytoplasmic bacterial protein. The expression of stress proteins is enhanced when cells are exposed to heat shock, nutrition starvation and certain other stress-inducing agents. YnaF promotes cell survival during prolonged exposure to stress and may activate a general mechanism for stress endurance. This manuscript reports preliminary crystallographic studies on YnaF from Salmonella typhimurium. The gene coding for YnaF was cloned and overexpressed and the protein was purified by Ni-NTA affinity chromatography. Purified YnaF was crystallized using vapour-diffusion and microbatch methods. The crystals belong to space group P2(1), with unit-cell parameters a = 37.51, b = 77.18, c = 56.34 A, beta = 101.8 degrees . A data set was collected to 2.5 A resolution with 94.6% completeness using an image-plate detector system mounted on a rotating-anode X-ray generator. Attempts to determine the structure are in progress.

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Year:  2007        PMID: 18007050      PMCID: PMC2339741          DOI: 10.1107/S1744309107048610

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  13 in total

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Authors:  A Vagin; A Teplyakov
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Authors:  M C Sousa; D B McKay
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Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2001-09-21

4.  KdpD and KdpE, proteins that control expression of the kdpABC operon, are members of the two-component sensor-effector class of regulators.

Authors:  M O Walderhaug; J W Polarek; P Voelkner; J M Daniel; J E Hesse; K Altendorf; W Epstein
Journal:  J Bacteriol       Date:  1992-04       Impact factor: 3.490

5.  Likelihood-enhanced fast translation functions.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Laurent C Storoni; Randy J Read
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-03-24

6.  Structure-based assignment of the biochemical function of a hypothetical protein: a test case of structural genomics.

Authors:  T I Zarembinski; L W Hung; H J Mueller-Dieckmann; K K Kim; H Yokota; R Kim; S H Kim
Journal:  Proc Natl Acad Sci U S A       Date:  1998-12-22       Impact factor: 11.205

7.  The universal stress protein paralogues of Escherichia coli are co-ordinately regulated and co-operate in the defence against DNA damage.

Authors:  N Gustavsson; A Diez; T Nyström
Journal:  Mol Microbiol       Date:  2002-01       Impact factor: 3.501

8.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

9.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

10.  Expression and role of the universal stress protein, UspA, of Escherichia coli during growth arrest.

Authors:  T Nyström; F C Neidhardt
Journal:  Mol Microbiol       Date:  1994-02       Impact factor: 3.501

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  2 in total

1.  Universal stress proteins are important for oxidative and acid stress resistance and growth of Listeria monocytogenes EGD-e in vitro and in vivo.

Authors:  Christa Seifart Gomes; Benjamin Izar; Farhad Pazan; Walid Mohamed; Mobarak Abu Mraheil; Krishnendu Mukherjee; André Billion; Yair Aharonowitz; Trinad Chakraborty; Torsten Hain
Journal:  PLoS One       Date:  2011-09-30       Impact factor: 3.240

2.  Characterization of the universal stress protein F from atypical enteropathogenic Escherichia coli and its prevalence in Enterobacteriaceae.

Authors:  Cristiane S de Souza; Alfredo G Torres; Andressa Caravelli; Anderson Silva; Juliana M Polatto; Roxane M F Piazza
Journal:  Protein Sci       Date:  2016-09-23       Impact factor: 6.725

  2 in total

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