Literature DB >> 18004856

Detection of reactive tetrahedral intermediates in a deep cavitand with an introverted functionality.

Richard J Hooley1, Tetsuo Iwasawa, Julius Rebek.   

Abstract

Labile hemiaminal intermediates are stabilized by binding in a deep cavitand with an introverted aldehyde functionality. The aldehyde is attached to the cavitand via an anthracene spacer that rotates rapidly about the cavitand rim. The half-lives of these hemiaminals vary from 30 min to over 100 h at ambient temperature, due to hydrogen bonding with the organized peptide-like framework at the cavitand rim. The intermediates are sufficiently long-lived to allow study by 2D NMR techniques requiring many hours of acquisition time. Mechanistic analysis of the dehydration step shows first-order kinetics. The analogous "extroverted" reaction was also performed, where the addition took place outside the cavitand, displaying standard steady-state kinetics; no hemiaminal was observed. The cavitand shows strong selectivity based not on binding affinity but upon the rate of the product-forming step. A 10:1 ratio of product imines was obtained, while the initial binding ratio was 1:1. The cavitand acts as a mimic of enzymes in that it uses weak binding forces to stabilize reactive intermediates and isolates them from the medium. The synthetic environment allows direct detection and analysis of the intermediates, as opposed to natural systems that must be analyzed indirectly.

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Year:  2007        PMID: 18004856     DOI: 10.1021/ja0759343

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  11 in total

1.  Reaction of isonitriles with carboxylic acids in a cavitand: observation of elusive isoimide intermediates.

Authors:  Per Restorp; Julius Rebek
Journal:  J Am Chem Soc       Date:  2008-08-13       Impact factor: 15.419

2.  Lithium cation enhances anion binding in a tripodal phosphine oxide-based ditopic receptor.

Authors:  Jesse V Gavette; Juven Lara; Orion B Berryman; Lev N Zakharov; Michael M Haley; Darren W Johnson
Journal:  Chem Commun (Camb)       Date:  2011-06-07       Impact factor: 6.222

3.  Hemiaminal route for the formation of interstellar glycine: a computational study.

Authors:  Zanele P Nhlabatsi; Priya Bhasi; Sanyasi Sitha
Journal:  J Mol Model       Date:  2019-11-09       Impact factor: 1.810

4.  The DFT study on the reaction between benzaldehyde and 4-amine-4H-1,2,4-triazole and their derivatives as a source of stable hemiaminals and Schiff bases. Effect of substitution and solvation on the reaction mechanism.

Authors:  Slawomir Berski; Agnieszka J Gordon; Leszek Zbigniew Ciunik
Journal:  J Mol Model       Date:  2015-02-21       Impact factor: 1.810

5.  Electronic and steric effects in binding of deep cavitands.

Authors:  Richard J Hooley; Siddhartha R Shenoy; Julius Rebek
Journal:  Org Lett       Date:  2008-12-04       Impact factor: 6.005

6.  Interaction energies and dynamics of acid-base pairs isolated in cavitands.

Authors:  Byron W Purse; Sara M Butterfield; Pablo Ballester; Alexander Shivanyuk; Julius Rebek
Journal:  J Org Chem       Date:  2008-08-02       Impact factor: 4.354

Review 7.  Chemistry and catalysis in functional cavitands.

Authors:  Richard J Hooley; Julius Rebek
Journal:  Chem Biol       Date:  2009-03-27

8.  X-ray observation of a transient hemiaminal trapped in a porous network.

Authors:  Takehide Kawamichi; Tsuyoshi Haneda; Masaki Kawano; Makoto Fujita
Journal:  Nature       Date:  2009-10-01       Impact factor: 49.962

9.  Synthesis and evaluation of novel heteroaromatic substrates of GABA aminotransferase.

Authors:  Dustin D Hawker; Richard B Silverman
Journal:  Bioorg Med Chem       Date:  2012-08-16       Impact factor: 3.641

10.  Lipid bilayer environments control exchange kinetics of deep cavitand hosts and enhance disfavored guest conformations.

Authors:  Lizeth Perez; Bethany G Caulkins; Magi Mettry; Leonard J Mueller; Richard J Hooley
Journal:  Chem Sci       Date:  2018-01-11       Impact factor: 9.825

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