Literature DB >> 17998818

Imprinting of opossum Igf2r in the absence of differential methylation and air.

Jennifer R Weidman1, Dana C Dolinoy, Kristin A Maloney, Jan-Fang Cheng, Randy L Jirtle.   

Abstract

Phylogenetic comparison of extant mammals with divergent imprint status is a powerful method for identifying critical components of imprint regulation at individual loci. The entire genomic region of Igf2r in the imprinted marsupials, Didelphis virginiana and Monodelphis domestica, and the non-imprinted monotreme, Ornithorhynchus anatinus, was isolated and sequenced. Genetic and epigenetic comparisons of over 160 kb of sequence were then performed in five distinct mammalian species. Surprisingly, opossum Igf2r is imprinted and maternally expressed despite the absence of the intron 2 CpG island (CpG2), antisense Igf2r RNA (Air) and differential methylation of the promoter (CpG1) required for imprinting of this gene in mice. These findings demonstrate that the genomic elements necessary for imprinted Igf2r expression in eutherians are not required for imprinting of this locus in metatherians. Thus, the regulatory mechanisms of Igf2r imprinting did not evolve convergently within the Therian subclass of mammals.

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Year:  2006        PMID: 17998818     DOI: 10.4161/epi.1.1.2592

Source DB:  PubMed          Journal:  Epigenetics        ISSN: 1559-2294            Impact factor:   4.528


  11 in total

1.  The principle of recursive genome function.

Authors:  Andras J Pellionisz
Journal:  Cerebellum       Date:  2008       Impact factor: 3.847

Review 2.  The origin and evolution of genomic imprinting and viviparity in mammals.

Authors:  Marilyn B Renfree; Shunsuke Suzuki; Tomoko Kaneko-Ishino
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-05       Impact factor: 6.237

3.  A phylogenetic approach to test for evidence of parental conflict or gene duplications associated with protein-encoding imprinted orthologous genes in placental mammals.

Authors:  Mary J O'Connell; Noeleen B Loughran; Thomas A Walsh; Mark T A Donoghue; Karl J Schmid; Charles Spillane
Journal:  Mamm Genome       Date:  2010-10-08       Impact factor: 2.957

Review 4.  Imprinting evolution and human health.

Authors:  Radhika Das; Daniel D Hampton; Randy L Jirtle
Journal:  Mamm Genome       Date:  2009-10-15       Impact factor: 2.957

5.  Intronic parent-of-origin dependent differential methylation at the Actn1 gene is conserved in rodents but is not associated with imprinted expression.

Authors:  John D Calaway; José Ignacio Domínguez; Megan E Hanson; Ezequiel C Cambranis; Fernando Pardo-Manuel de Villena; Elena de la Casa-Esperon
Journal:  PLoS One       Date:  2012-11-08       Impact factor: 3.240

6.  Convergent and divergent evolution of genomic imprinting in the marsupial Monodelphis domestica.

Authors:  Radhika Das; Nathan Anderson; Maryellen I Koran; Jennifer R Weidman; Tarjei S Mikkelsen; Michael Kamal; Susan K Murphy; Kerstin Linblad-Toh; John M Greally; Randy L Jirtle
Journal:  BMC Genomics       Date:  2012-08-16       Impact factor: 3.969

7.  Epigenetic reprogramming in the porcine germ line.

Authors:  Sara M W Hyldig; Nicola Croxall; David A Contreras; Preben D Thomsen; Ramiro Alberio
Journal:  BMC Dev Biol       Date:  2011-02-25       Impact factor: 1.978

Review 8.  Long non-coding RNA modifies chromatin: epigenetic silencing by long non-coding RNAs.

Authors:  Alka Saxena; Piero Carninci
Journal:  Bioessays       Date:  2011-09-14       Impact factor: 4.345

9.  Evolution of the Short Form of DNMT3A, DNMT3A2, Occurred in the Common Ancestor of Mammals.

Authors:  Teruhito Ishihara; Danielle Hickford; Jane C Fenelon; Oliver W Griffith; Shunsuke Suzuki; Marilyn B Renfree
Journal:  Genome Biol Evol       Date:  2022-07-02       Impact factor: 4.065

10.  An exon splice enhancer primes IGF2:IGF2R binding site structure and function evolution.

Authors:  Christopher Williams; Hans-Jürgen Hoppe; Dellel Rezgui; Madeleine Strickland; Briony E Forbes; Frank Grutzner; Susana Frago; Rosamund Z Ellis; Pakorn Wattana-Amorn; Stuart N Prince; Oliver J Zaccheo; Catherine M Nolan; Andrew J Mungall; E Yvonne Jones; Matthew P Crump; A Bassim Hassan
Journal:  Science       Date:  2012-11-30       Impact factor: 47.728

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