Literature DB >> 1799628

Wobble position modified nucleosides evolved to select transfer RNA codon recognition: a modified-wobble hypothesis.

P F Agris1.   

Abstract

While recognized that some wobble exists in the base pairing of the first base of the tRNA anticodon with the third of the codon, specific base modifications have evolved to select particular codons. This modified-wobble theory would be exemplified by a single codon recognition imposed on the anticodon by modification of the tRNA wobble position nucleoside.

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Year:  1991        PMID： 1799628     DOI： 10.1016/0300-9084(91)90163-u

Source DB:  PubMed          Journal:  Biochimie        ISSN： 0300-9084            Impact factor:   4.079


  44 in total

1.  Analysis of codon:anticodon interactions within the ribosome provides new insights into codon reading and the genetic code structure.

Authors:  V I Lim; J F Curran
Journal:  RNA       Date:  2001-07       Impact factor: 4.942

2.  tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features.

Authors:  Christian Marck; Henri Grosjean
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

3.  Bringing order to translation: the contributions of transfer RNA anticodon-domain modifications.

Authors:  Paul F Agris
Journal:  EMBO Rep       Date:  2008-06-13       Impact factor: 8.807

4.  Ribosome binding of DNA analogs of tRNA requires base modifications and supports the "extended anticodon".

Authors:  V Dao; R Guenther; A Malkiewicz; B Nawrot; E Sochacka; A Kraszewski; J Jankowska; K Everett; P F Agris
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-15       Impact factor: 11.205

5.  Importance of a tRNA anticodon loop modification and a conserved, noncanonical anticodon stem pairing in tRNACGGProfor decoding

Authors:  Ha An Nguyen; Eric D Hoffer; Christine M Dunham
Journal:  J Biol Chem       Date:  2019-02-19       Impact factor: 5.157

6.  NMR-based Structural Analysis of Threonylcarbamoyl-AMP Synthase and Its Substrate Interactions.

Authors:  Kimberly A Harris; Benjamin G Bobay; Kathryn L Sarachan; Alexis F Sims; Yann Bilbille; Christopher Deutsch; Dirk Iwata-Reuyl; Paul F Agris
Journal:  J Biol Chem       Date:  2015-06-09       Impact factor: 5.157

7.  Abbreviated Pathway for Biosynthesis of 2-Thiouridine in Bacillus subtilis.

Authors:  Katherine A Black; Patricia C Dos Santos
Journal:  J Bacteriol       Date:  2015-03-30       Impact factor: 3.490

8.  Modified Quadrupole Ion Trap Mass Spectrometer for Infrared Ion Spectroscopy: Application to Protonated Thiated Uridines.

Authors:  L A Hamlow; Y Zhu; Zachary J Devereaux; N A Cunningham; G Berden; J Oomens; M T Rodgers
Journal:  J Am Soc Mass Spectrom       Date:  2018-08-22       Impact factor: 3.109

9.  A Platform for Discovery and Quantification of Modified Ribonucleosides in RNA: Application to Stress-Induced Reprogramming of tRNA Modifications.

Authors:  Weiling Maggie Cai; Yok Hian Chionh; Fabian Hia; Chen Gu; Stefanie Kellner; Megan E McBee; Chee Sheng Ng; Yan Ling Joy Pang; Erin G Prestwich; Kok Seong Lim; I Ramesh Babu; Thomas J Begley; Peter C Dedon
Journal:  Methods Enzymol       Date:  2015-07-17       Impact factor: 1.600

10.  Free energy calculation of modified base-pair formation in explicit solvent: A predictive model.

Authors:  Franck A P Vendeix; Antonio M Munoz; Paul F Agris
Journal:  RNA       Date:  2009-10-27       Impact factor: 4.942
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