Literature DB >> 1799462

Identity elements of Escherichia coli tRNA(Ala).

K Tamura1, H Asahara, H Himeno, T Hasegawa, M Shimizu.   

Abstract

Studies using the T7 transcription system revealed that the discriminator base A73 and the G20 in the variable pocket play important roles in the Escherichia coli alanine tRNA identity. The C60 in the T-loop, which is unique to alanine tRNA, was not found to be crucial for alanine identity. Anticodon replacement into the valine anticodon UAC did not decrease alanine charging activity, and no alanine charging activity was detected in the mutant valine tRNA possessing the alanine anticodon UGC.

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Year:  1991        PMID: 1799462     DOI: 10.1002/jmr.300040404

Source DB:  PubMed          Journal:  J Mol Recognit        ISSN: 0952-3499            Impact factor:   2.137


  16 in total

1.  Importance of the conserved nucleotides around the tRNA-like structure of Escherichia coli transfer-messenger RNA for protein tagging.

Authors:  K Hanawa-Suetsugu; V Bordeau; H Himeno; A Muto; B Felden
Journal:  Nucleic Acids Res       Date:  2001-11-15       Impact factor: 16.971

2.  Determinants on tmRNA for initiating efficient and precise trans-translation: some mutations upstream of the tag-encoding sequence of Escherichia coli tmRNA shift the initiation point of trans-translation in vitro.

Authors:  S Lee; M Ishii; T Tadaki; A Muto; H Himeno
Journal:  RNA       Date:  2001-07       Impact factor: 4.942

3.  SmpB functions in various steps of trans-translation.

Authors:  Kyoko Hanawa-Suetsugu; Mitsuru Takagi; Hachiro Inokuchi; Hyouta Himeno; Akira Muto
Journal:  Nucleic Acids Res       Date:  2002-04-01       Impact factor: 16.971

4.  Expression of bovine mitochondrial tRNASer GCU derivatives in Escherichia coli.

Authors:  I Hayashi; G Kawai; K Watanabe
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

5.  A functional interaction of SmpB with tmRNA for determination of the resuming point of trans-translation.

Authors:  Takayuki Konno; Daisuke Kurita; Kazuma Takada; Akira Muto; Hyouta Himeno
Journal:  RNA       Date:  2007-08-13       Impact factor: 4.942

6.  Bases in the anticodon loop of tRNA(Ala)(GGC) prevent misreading.

Authors:  Hiroshi Murakami; Atsushi Ohta; Hiroaki Suga
Journal:  Nat Struct Mol Biol       Date:  2009-03-22       Impact factor: 15.369

7.  Mosaic tile model for tRNA-enzyme recognition.

Authors:  S V Steinberg; L L Kisselev
Journal:  Nucleic Acids Res       Date:  1993-04-25       Impact factor: 16.971

8.  Presence and location of modified nucleotides in Escherichia coli tmRNA: structural mimicry with tRNA acceptor branches.

Authors:  B Felden; K Hanawa; J F Atkins; H Himeno; A Muto; R F Gesteland; J A McCloskey; P F Crain
Journal:  EMBO J       Date:  1998-06-01       Impact factor: 11.598

9.  Specific atomic groups and RNA helix geometry in acceptor stem recognition by a tRNA synthetase.

Authors:  P J Beuning; F Yang; P Schimmel; K Musier-Forsyth
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

10.  Genome of bacteriophage P1.

Authors:  Małgorzata B Łobocka; Debra J Rose; Guy Plunkett; Marek Rusin; Arkadiusz Samojedny; Hansjörg Lehnherr; Michael B Yarmolinsky; Frederick R Blattner
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

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