Literature DB >> 17993566

Eucaryotic diversity in a hypersaline microbial mat.

Leah M Feazel1, John R Spear, Alicia B Berger, J Kirk Harris, Daniel N Frank, Ruth E Ley, Norman R Pace.   

Abstract

To determine the eucaryotic diversity of the hypersaline Guerrero Negro microbial mat, we amplified 18S rRNA genes from DNA extracted from this mat and constructed and analyzed clone libraries. The extent of eucaryotic diversity detected was remarkably low, only 15 species among 890 clones analyzed. Six eucaryotic kingdoms were represented, as well as a novel cluster of sequences. Nematode sequences dominated the clone libraries.

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Year:  2007        PMID： 17993566      PMCID： PMC2223211          DOI： 10.1128/AEM.01448-07

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  15 in total

1.  Complexity in natural microbial ecosystems: the Guerrero Negro experience.

Authors:  John R Spear; Ruth E Ley; Alicia B Berger; Norman R Pace
Journal:  Biol Bull       Date:  2003-04       Impact factor: 1.818

2.  Long-term manipulations of intact microbial mat communities in a greenhouse collaboratory: simulating earth's present and past field environments.

Authors:  Brad M Bebout; Steven P Carpenter; David J Des Marais; Mykell Discipulo; Tsegereda Embaye; Ferran Garcia-Pichel; Tori M Hoehler; Mary Hogan; Linda L Jahnke; Richard M Keller; Scott R Miller; Leslie E Prufert-Bebout; Chris Raleigh; Michael Rothrock; Kendra Turk
Journal:  Astrobiology       Date:  2002       Impact factor: 4.335

3.  Novel eukaryotic lineages inferred from small-subunit rRNA analyses of oxygen-depleted marine environments.

Authors:  Thorsten Stoeck; Slava Epstein
Journal:  Appl Environ Microbiol       Date:  2003-05       Impact factor: 4.792

4.  An improved molecular phylogeny of the Nematoda with special emphasis on marine taxa.

Authors:  Birgit H M Meldal; Nicola J Debenham; Paul De Ley; Irma Tandingan De Ley; Jacques R Vanfleteren; Andy R Vierstraete; Wim Bert; Gaetan Borgonie; Tom Moens; Paul A Tyler; Melanie C Austen; Mark L Blaxter; Alex D Rogers; P J D Lambshead
Journal:  Mol Phylogenet Evol       Date:  2006-09-23       Impact factor: 4.286

5.  Comparative nematode photoreceptors.

Authors:  N A Croll; A A Evans; J M Smith
Journal:  Comp Biochem Physiol A Comp Physiol       Date:  1975-05-01

6.  Bias in template-to-product ratios in multitemplate PCR.

Authors:  M F Polz; C M Cavanaugh
Journal:  Appl Environ Microbiol       Date:  1998-10       Impact factor: 4.792

7.  Community structure of a microbial mat: the phylogenetic dimension.

Authors:  J B Risatti; W C Capman; D A Stahl
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-11       Impact factor: 11.205

8.  Microbial diversity of cryptoendolithic communities from the McMurdo Dry Valleys, Antarctica.

Authors:  José R de la Torre; Brett M Goebel; E Imre Friedmann; Norman R Pace
Journal:  Appl Environ Microbiol       Date:  2003-07       Impact factor: 4.792

9.  Determination of nitrogen-fixing phylotypes in Lyngbya sp. and Microcoleus chthonoplastes cyanobacterial mats from Guerrero Negro, Baja California, Mexico.

Authors:  Enoma O Omoregie; Lori L Crumbliss; Brad M Bebout; Jonathan P Zehr
Journal:  Appl Environ Microbiol       Date:  2004-04       Impact factor: 4.792

10.  Ocellar pigmentation and phototaxis in the nematode Mermis nigrescens: changes during development.

Authors:  A H Burr; D Wagar; P Sidhu
Journal:  J Exp Biol       Date:  2000-04       Impact factor: 3.312
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  21 in total

1.  Phototrophic phylotypes dominate mesothermal microbial mats associated with hot springs in Yellowstone National Park.

Authors:  Kimberly A Ross; Leah M Feazel; Charles E Robertson; Babu Z Fathepure; Katherine E Wright; Rebecca M Turk-Macleod; Mallory M Chan; Nicole L Held; John R Spear; Norman R Pace
Journal:  Microb Ecol       Date:  2012-02-11       Impact factor: 4.552

2.  [FeFe] hydrogenase genetic diversity provides insight into molecular adaptation in a saline microbial mat community.

Authors:  Eric S Boyd; John R Spear; John W Peters
Journal:  Appl Environ Microbiol       Date:  2009-05-08       Impact factor: 4.792

3.  Characterization of halophiles isolated from solar salterns in Baja California, Mexico.

Authors:  Shereen Sabet; Lamine Diallo; Lauren Hays; Woosung Jung; Jesse G Dillon
Journal:  Extremophiles       Date:  2009-05-06       Impact factor: 2.395

4.  Diversity and stratification of archaea in a hypersaline microbial mat.

Authors:  Charles E Robertson; John R Spear; J Kirk Harris; Norman R Pace
Journal:  Appl Environ Microbiol       Date:  2008-12-29       Impact factor: 4.792

5.  Secondary metabolites produced by fungi derived from a microbial mat encountered in an iron-rich natural spring.

Authors:  Alexandra L Gerea; Katie M Branscum; Jarrod B King; Jianlan You; Douglas R Powell; Andrew N Miller; John R Spear; Robert H Cichewicz
Journal:  Tetrahedron Lett       Date:  2012-06-08       Impact factor: 2.415

6.  Active eukaryotes in microbialites from Highborne Cay, Bahamas, and Hamelin Pool (Shark Bay), Australia.

Authors:  Virginia P Edgcomb; Joan M Bernhard; Roger E Summons; William Orsi; David Beaudoin; Pieter T Visscher
Journal:  ISME J       Date:  2013-08-08       Impact factor: 10.302

7.  Unveiling microbial interactions in stratified mat communities from a warm saline shallow pond.

Authors:  Aurélien Saghaï; Ana Gutiérrez-Preciado; Philippe Deschamps; David Moreira; Paola Bertolino; Marie Ragon; Purificación López-García
Journal:  Environ Microbiol       Date:  2017-05-10       Impact factor: 5.491

8.  Microbial mats: an ecological niche for fungi.

Authors:  Sharon A Cantrell; Lisabeth Duval-Pérez
Journal:  Front Microbiol       Date:  2013-04-05       Impact factor: 5.640

9.  Phylogenetic analysis of a microbialite-forming microbial mat from a hypersaline lake of the Kiritimati atoll, Central Pacific.

Authors:  Dominik Schneider; Gernot Arp; Andreas Reimer; Joachim Reitner; Rolf Daniel
Journal:  PLoS One       Date:  2013-06-10       Impact factor: 3.240

10.  Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat.

Authors:  J Kirk Harris; J Gregory Caporaso; Jeffrey J Walker; John R Spear; Nicholas J Gold; Charles E Robertson; Philip Hugenholtz; Julia Goodrich; Daniel McDonald; Dan Knights; Paul Marshall; Henry Tufo; Rob Knight; Norman R Pace
Journal:  ISME J       Date:  2012-07-26       Impact factor: 10.302
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