Literature DB >> 17992749

An anatomical ontology for amphibians.

Anne M Maglia1, Jennifer L Leopold, L Analía Pugener, Susan Gauch.   

Abstract

Herein, we describe our ongoing efforts to develop a robust ontology for amphibian anatomy that accommodates the diversity of anatomical structures present in the group. We discuss the design and implementation of the project, current resolutions to issues we have encountered, and future enhancements to the ontology. We also comment on future efforts to integrate other data sets via this amphibian anatomical ontology.

Mesh：

Year:  2007        PMID： 17992749

Source DB:  PubMed          Journal:  Pac Symp Biocomput        ISSN： 2335-6928


  14 in total

1.  An ontology-based comparative anatomy information system.

Authors:  Ravensara S Travillian; Kremena Diatchka; Tejinder K Judge; Katarzyna Wilamowska; Linda G Shapiro
Journal:  Artif Intell Med       Date:  2010-12-10       Impact factor: 5.326

2.  Assessing Bayesian Phylogenetic Information Content of Morphological Data Using Knowledge From Anatomy Ontologies.

Authors:  Diego S Porto; Wasila M Dahdul; Hilmar Lapp; James P Balhoff; Todd J Vision; Paula M Mabee; Josef Uyeda
Journal:  Syst Biol       Date:  2022-10-12       Impact factor: 9.160

3.  The teleost anatomy ontology: anatomical representation for the genomics age.

Authors:  Wasila M Dahdul; John G Lundberg; Peter E Midford; James P Balhoff; Hilmar Lapp; Todd J Vision; Melissa A Haendel; Monte Westerfield; Paula M Mabee
Journal:  Syst Biol       Date:  2010-03-29       Impact factor: 15.683

4.  Skeletal morphology and development of the olfactory region of Spea (Anura: Scaphiopodidae).

Authors:  L A Pugener; A M Maglia
Journal:  J Anat       Date:  2007-12       Impact factor: 2.610

5.  Uberon, an integrative multi-species anatomy ontology.

Authors:  Christopher J Mungall; Carlo Torniai; Georgios V Gkoutos; Suzanna E Lewis; Melissa A Haendel
Journal:  Genome Biol       Date:  2012-01-31       Impact factor: 13.583

6.  Moving the mountain: analysis of the effort required to transform comparative anatomy into computable anatomy.

Authors:  Wasila Dahdul; T Alexander Dececchi; Nizar Ibrahim; Hilmar Lapp; Paula Mabee
Journal:  Database (Oxford)       Date:  2015-05-13       Impact factor: 3.451

7.  Integrating phenotype ontologies across multiple species.

Authors:  Christopher J Mungall; Georgios V Gkoutos; Cynthia L Smith; Melissa A Haendel; Suzanna E Lewis; Michael Ashburner
Journal:  Genome Biol       Date:  2010-01-08       Impact factor: 13.583

8.  A unified anatomy ontology of the vertebrate skeletal system.

Authors:  Wasila M Dahdul; James P Balhoff; David C Blackburn; Alexander D Diehl; Melissa A Haendel; Brian K Hall; Hilmar Lapp; John G Lundberg; Christopher J Mungall; Martin Ringwald; Erik Segerdell; Ceri E Van Slyke; Matthew K Vickaryous; Monte Westerfield; Paula M Mabee
Journal:  PLoS One       Date:  2012-12-10       Impact factor: 3.240

9.  An ontology for Xenopus anatomy and development.

Authors:  Erik Segerdell; Jeff B Bowes; Nicolas Pollet; Peter D Vize
Journal:  BMC Dev Biol       Date:  2008-09-25       Impact factor: 1.978

10.  Enhanced XAO: the ontology of Xenopus anatomy and development underpins more accurate annotation of gene expression and queries on Xenbase.

Authors:  Erik Segerdell; Virgilio G Ponferrada; Christina James-Zorn; Kevin A Burns; Joshua D Fortriede; Wasila M Dahdul; Peter D Vize; Aaron M Zorn
Journal:  J Biomed Semantics       Date:  2013-10-18
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.