Literature DB >> 17988154

Catalytic cycle of ATP hydrolysis by P-glycoprotein: evidence for formation of the E.S reaction intermediate with ATP-gamma-S, a nonhydrolyzable analogue of ATP.

Zuben E Sauna1, In-Wha Kim, Krishnamachary Nandigama, Stephan Kopp, Peter Chiba, Suresh V Ambudkar.   

Abstract

Structural and biochemical studies of ATP-binding cassette (ABC) transporters suggest that an ATP-driven dimerization of the nucleotide-binding domains (NBDs) is an important reaction intermediate of the transport cycle. Moreover, an asymmetric occlusion of ATP at one of the two ATP sites of P-glycoprotein (Pgp) may follow the formation of the symmetric dimer. It has also been postulated that ADP drives the dissociation of the dimer. In this study, we show that the E.S conformation of Pgp (previously demonstrated in the E556Q/E1201Q mutant Pgp) can be obtained with the wild-type protein by use of the nonhydrolyzable ATP analogue ATP-gamma-S. ATP-gamma-S is occluded into the Pgp NBDs at 34 degrees C but not at 4 degrees C, whereas ATP is not occluded at either temperature. Using purified Pgp incorporated into proteoliposomes and ATP-gamma-35S, we demonstrate that the occlusion of ATP-gamma-35S has an Eact of 60 kJ/mol and the stoichiometry of ATP-gamma-35S:Pgp is 1:1 (mol/mol). Additionally, in the conserved Walker B mutant (E556Q/E1201Q) of Pgp, we find occlusion of the nucleoside triphosphate but not the nucleoside diphosphate. Furthermore, Pgp in the occluded nucleotide conformation has reduced affinity for transport substrates. These data provide evidence for the ATP-driven dimerization and ADP-driven dissociation of the NBDs, and although two ATP molecules may initiate dimerization, only one is driven to an occluded pre-hydrolysis intermediate state. Thus, in a full-length ABC transporter like Pgp, it is unlikely that there is complete association and disassociation of NBDs and the occluded nucleotide conformation at one of the NBDs provides the power-stroke at the transport-substrate site.

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Year:  2007        PMID: 17988154     DOI: 10.1021/bi701385t

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  49 in total

1.  Conformational analysis of human ATP-binding cassette transporter ABCB1 in lipid nanodiscs and inhibition by the antibodies MRK16 and UIC2.

Authors:  Tasha K Ritchie; Hyewon Kwon; William M Atkins
Journal:  J Biol Chem       Date:  2011-09-21       Impact factor: 5.157

2.  P-glycoprotein retains drug-stimulated ATPase activity upon covalent linkage of the two nucleotide binding domains at their C-terminal ends.

Authors:  Brandy Verhalen; Stephan Wilkens
Journal:  J Biol Chem       Date:  2011-01-28       Impact factor: 5.157

3.  Dissociation of ATP-binding cassette nucleotide-binding domain dimers into monomers during the hydrolysis cycle.

Authors:  Maria E Zoghbi; Srinivasan Krishnan; Guillermo A Altenberg
Journal:  J Biol Chem       Date:  2012-03-08       Impact factor: 5.157

4.  Time-resolved Fourier transform infrared spectroscopy of the nucleotide-binding domain from the ATP-binding Cassette transporter MsbA: ATP hydrolysis is the rate-limiting step in the catalytic cycle.

Authors:  Falk Syberg; Yan Suveyzdis; Carsten Kötting; Klaus Gerwert; Eckhard Hofmann
Journal:  J Biol Chem       Date:  2012-05-16       Impact factor: 5.157

5.  Molecular-dynamics simulations of the ATP/apo state of a multidrug ATP-binding cassette transporter provide a structural and mechanistic basis for the asymmetric occluded state.

Authors:  Peter M Jones; Anthony M George
Journal:  Biophys J       Date:  2011-06-22       Impact factor: 4.033

6.  Structural consequences of ATP hydrolysis on the ABC transporter NBD dimer: molecular dynamics studies of HlyB.

Authors:  João M Damas; A Sofia F Oliveira; António M Baptista; Cláudio M Soares
Journal:  Protein Sci       Date:  2011-07       Impact factor: 6.725

7.  Converting nonhydrolyzable nucleotides to strong cystic fibrosis transmembrane conductance regulator (CFTR) agonists by gain of function (GOF) mutations.

Authors:  George Okeyo; Wei Wang; Shipeng Wei; Kevin L Kirk
Journal:  J Biol Chem       Date:  2013-04-25       Impact factor: 5.157

8.  ATP-dependent thermostabilization of human P-glycoprotein (ABCB1) is blocked by modulators.

Authors:  Sabrina Lusvarghi; Suresh V Ambudkar
Journal:  Biochem J       Date:  2019-12-19       Impact factor: 3.857

9.  Conserved Walker A cysteines 431 and 1074 in human P-glycoprotein are accessible to thiol-specific agents in the apo and ADP-vanadate trapped conformations.

Authors:  Hong-May Sim; Jaya Bhatnagar; Eduardo E Chufan; Khyati Kapoor; Suresh V Ambudkar
Journal:  Biochemistry       Date:  2013-10-04       Impact factor: 3.162

10.  Identification of the distance between the homologous halves of P-glycoprotein that triggers the high/low ATPase activity switch.

Authors:  Tip W Loo; David M Clarke
Journal:  J Biol Chem       Date:  2014-02-12       Impact factor: 5.157

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