Literature DB >> 17978192

In vitro synthesis of the iron-molybdenum cofactor of nitrogenase from iron, sulfur, molybdenum, and homocitrate using purified proteins.

Leonardo Curatti1, Jose A Hernandez, Robert Y Igarashi, Basem Soboh, Dehua Zhao, Luis M Rubio.   

Abstract

Biological nitrogen fixation, the conversion of atmospheric N2 to NH3, is an essential process in the global biogeochemical cycle of nitrogen that supports life on Earth. Most of the biological nitrogen fixation is catalyzed by the molybdenum nitrogenase, which contains at its active site one of the most complex metal cofactors known to date, the iron-molybdenum cofactor (FeMo-co). FeMo-co is composed of 7Fe, 9S, Mo, R-homocitrate, and one unidentified light atom. Here we demonstrate the complete in vitro synthesis of FeMo-co from Fe(2+), S(2-), MoO4(2-), and R-homocitrate using only purified Nif proteins. This synthesis provides direct biochemical support to the current model of FeMo-co biosynthesis. A minimal in vitro system, containing NifB, NifEN, and NifH proteins, together with Fe(2+), S(2-), MoO4(2-), R-homocitrate, S-adenosyl methionine, and Mg-ATP, is sufficient for the synthesis of FeMo-co and the activation of apo-dinitrogenase under anaerobic-reducing conditions. This in vitro system also provides a biochemical approach to further study the function of accessory proteins involved in nitrogenase maturation (as shown here for NifX and NafY). The significance of these findings in the understanding of the complete FeMo-co biosynthetic pathway and in the study of other complex Fe-S cluster biosyntheses is discussed.

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Year:  2007        PMID: 17978192      PMCID: PMC2077076          DOI: 10.1073/pnas.0703050104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  30 in total

1.  Comparative biochemical characterization of the iron-only nitrogenase and the molybdenum nitrogenase from Rhodobacter capsulatus.

Authors:  K Schneider; U Gollan; M Dröttboom; S Selsemeier-Voigt; A Müller
Journal:  Eur J Biochem       Date:  1997-03-15

2.  Inhibition of iron-molybdenum cofactor biosynthesis by L127Delta NifH and evidence for a complex formation between L127Delta NifH and NifNE.

Authors:  P Rangaraj; M J Ryle; W N Lanzilotta; P J Goodwin; D R Dean; V K Shah; P W Ludden
Journal:  J Biol Chem       Date:  1999-10-08       Impact factor: 5.157

3.  Nitrogenase. IV. Simple method of purification to homogeneity of nitrogenase components from Azotobacter vinelandii.

Authors:  V K Shah; W J Brill
Journal:  Biochim Biophys Acta       Date:  1973-05-30

4.  Requirement of NifX and other nif proteins for in vitro biosynthesis of the iron-molybdenum cofactor of nitrogenase.

Authors:  V K Shah; P Rangaraj; R Chatterjee; R M Allen; J T Roll; G P Roberts; P W Ludden
Journal:  J Bacteriol       Date:  1999-05       Impact factor: 3.490

5.  Purification of a second alternative nitrogenase from a nifHDK deletion strain of Azotobacter vinelandii.

Authors:  J R Chisnell; R Premakumar; P E Bishop
Journal:  J Bacteriol       Date:  1988-01       Impact factor: 3.490

6.  The nitrogenase FeMo-cofactor and P-cluster pair: 2.2 A resolution structures.

Authors:  M K Chan; J Kim; D C Rees
Journal:  Science       Date:  1993-05-07       Impact factor: 47.728

7.  Catalytic and biophysical properties of a nitrogenase Apo-MoFe protein produced by a nifB-deletion mutant of Azotobacter vinelandii.

Authors:  J Christiansen; P J Goodwin; W N Lanzilotta; L C Seefeldt; D R Dean
Journal:  Biochemistry       Date:  1998-09-08       Impact factor: 3.162

8.  Apodinitrogenase: purification, association with a 20-kilodalton protein, and activation by the iron-molybdenum cofactor in the absence of dinitrogenase reductase.

Authors:  T D Paustian; V K Shah; G P Roberts
Journal:  Biochemistry       Date:  1990-04-10       Impact factor: 3.162

9.  In vitro synthesis of the iron-molybdenum cofactor of nitrogenase. Purification and characterization of NifB cofactor, the product of NIFB protein.

Authors:  V K Shah; J R Allen; N J Spangler; P W Ludden
Journal:  J Biol Chem       Date:  1994-01-14       Impact factor: 5.157

10.  Isolation of an iron-molybdenum cofactor from nitrogenase.

Authors:  V K Shah; W J Brill
Journal:  Proc Natl Acad Sci U S A       Date:  1977-08       Impact factor: 11.205

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  35 in total

1.  Characterization of the NifA-RpoN regulon in Rhizobium etli in free life and in symbiosis with Phaseolus vulgaris.

Authors:  Emmanuel Salazar; J Javier Díaz-Mejía; Gabriel Moreno-Hagelsieb; Gabriel Martínez-Batallar; Yolanda Mora; Jaime Mora; Sergio Encarnación
Journal:  Appl Environ Microbiol       Date:  2010-05-07       Impact factor: 4.792

2.  RNA processing of nitrogenase transcripts in the cyanobacterium Anabaena variabilis.

Authors:  Justin L Ungerer; Brenda S Pratte; Teresa Thiel
Journal:  J Bacteriol       Date:  2010-04-30       Impact factor: 3.490

3.  Crystal structure of cce_0566 from Cyanothece 51142, a protein associated with nitrogen fixation in the DUF269 family.

Authors:  Garry W Buchko; Howard Robinson
Journal:  FEBS Lett       Date:  2012-01-28       Impact factor: 4.124

4.  Role of RNA secondary structure and processing in stability of the nifH1 transcript in the cyanobacterium Anabaena variabilis.

Authors:  Brenda S Pratte; Justin Ungerer; Teresa Thiel
Journal:  J Bacteriol       Date:  2015-02-09       Impact factor: 3.490

5.  Role of the nifB1 and nifB2 Promoters in Cell-Type-Specific Expression of Two Mo Nitrogenases in the Cyanobacterium Anabaena variabilis ATCC 29413.

Authors:  Susan A Vernon; Brenda S Pratte; Teresa Thiel
Journal:  J Bacteriol       Date:  2017-01-30       Impact factor: 3.490

Review 6.  Radical S-adenosylmethionine enzymes.

Authors:  Joan B Broderick; Benjamin R Duffus; Kaitlin S Duschene; Eric M Shepard
Journal:  Chem Rev       Date:  2014-01-29       Impact factor: 60.622

7.  Metal trafficking for nitrogen fixation: NifQ donates molybdenum to NifEN/NifH for the biosynthesis of the nitrogenase FeMo-cofactor.

Authors:  Jose A Hernandez; Leonardo Curatti; Constantino P Aznar; Zinaida Perova; R David Britt; Luis M Rubio
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-12       Impact factor: 11.205

8.  Methanogen homoaconitase catalyzes both hydrolyase reactions in coenzyme B biosynthesis.

Authors:  Randy M Drevland; Yunhua Jia; David R J Palmer; David E Graham
Journal:  J Biol Chem       Date:  2008-09-02       Impact factor: 5.157

9.  Natural history of the E1-like superfamily: implication for adenylation, sulfur transfer, and ubiquitin conjugation.

Authors:  A Maxwell Burroughs; Lakshminarayan M Iyer; L Aravind
Journal:  Proteins       Date:  2009-06

10.  Tyrosine, cysteine, and S-adenosyl methionine stimulate in vitro [FeFe] hydrogenase activation.

Authors:  Jon M Kuchenreuther; James A Stapleton; James R Swartz
Journal:  PLoS One       Date:  2009-10-26       Impact factor: 3.240

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