Literature DB >> 17977854

D-Serine dehydratase from chicken kidney: a vertebral homologue of the cryptic enzyme from Burkholderia cepacia.

Hiroyuki Tanaka1, Atsushi Yamamoto, Tetsuo Ishida, Kihachiro Horiike.   

Abstract

D-serine dehydratase (DSD) catalyses the conversion of d-serine to pyruvate and ammonia. d-Serine is a physiological modulator of glutamate neurotransmission in vertebrate brains. In mammals d-serine is degraded by d-amino-acid oxidase, whereas in chicken brain it is degraded by DSD, as we have recently demonstrated [Tanaka et al. (2007) Anal. Biochem. 362, 83-88]. To clarify the roles of DSD in avian species, we purified DSD from chicken kidney. The purified enzyme was a heterodimer consisting of subunits separable by SDS-PAGE but with identical N-terminal amino acid sequences. The prominent absorption at 416 nm and the inhibition of the enzyme both by hydroxylamine and by aminooxyacetate suggested that the enzyme contains pyridoxal 5'-phosphate as a cofactor. The enzyme showed the highest specificity to d-serine: the k(cat)/K(m) values of DSD for d-serine, d-threonine and l-serine were 6.19 x 10(3), 164 and 16 M(-1)s(-1), respectively. DSD was found immunohistochemically in the proximal tubules of the chicken kidney. Judging from the amino acid sequence deduced from the cDNA, chicken DSD is a homologue of cryptic DSD from Burkholderia cepacia and low-specificity d-threonine aldolase from Arthrobacter sp. strain DK-38, all of which have a cofactor binding motif of PHXK(T/A) in their N-terminal portions.

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Year:  2007        PMID: 17977854     DOI: 10.1093/jb/mvm203

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  6 in total

1.  Crystallization and preliminary crystallographic analysis of D-serine dehydratase from chicken kidney.

Authors:  Miki Senda; Hiroyuki Tanaka; Tetsuo Ishida; Kihachiro Horiike; Toshiya Senda
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-12-24

2.  Crystal structure of a zinc-dependent D-serine dehydratase from chicken kidney.

Authors:  Hiroyuki Tanaka; Miki Senda; Nagarajan Venugopalan; Atsushi Yamamoto; Toshiya Senda; Tetsuo Ishida; Kihachiro Horiike
Journal:  J Biol Chem       Date:  2011-06-15       Impact factor: 5.157

3.  Spatiotemporal localization of D-amino acid oxidase and D-aspartate oxidases during development in Caenorhabditis elegans.

Authors:  Yasuaki Saitoh; Masumi Katane; Tomonori Kawata; Kazuhiro Maeda; Masae Sekine; Takemitsu Furuchi; Hiroyuki Kobuna; Taro Sakamoto; Takao Inoue; Hiroyuki Arai; Yasuhito Nakagawa; Hiroshi Homma
Journal:  Mol Cell Biol       Date:  2012-03-05       Impact factor: 4.272

4.  Crystallization and preliminary X-ray diffraction studies of D-threo-3-hydroxyaspartate dehydratase isolated from Delftia sp. HT23.

Authors:  Yu Matsumoto; Yoshiaki Yasutake; Yuki Takeda; Tomohiro Tamura; Atsushi Yokota; Masaru Wada
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-09-28

5.  Heterogeneity of D-Serine Distribution in the Human Central Nervous System.

Authors:  Masataka Suzuki; Nobuaki Imanishi; Masashi Mita; Kenji Hamase; Sadakazu Aiso; Jumpei Sasabe
Journal:  ASN Neuro       Date:  2017 May-Jun       Impact factor: 4.146

6.  Urinary l-erythro-β-hydroxyasparagine-a novel serine racemase inhibitor and substrate of the Zn2+-dependent d-serine dehydratase.

Authors:  Tomokazu Ito; Mayuka Tono; Yasuyuki Kitaura; Hisashi Hemmi; Tohru Yoshimura
Journal:  Biosci Rep       Date:  2021-04-30       Impact factor: 3.840

  6 in total

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