Literature DB >> 17973499

Heteronuclear 1H-31P statistical total correlation NMR spectroscopy of intact liver for metabolic biomarker assignment: application to galactosamine-induced hepatotoxicity.

Muireann Coen1, Young-Shick Hong, Olivier Cloarec, Cindy M Rhode, Michael D Reily, Donald G Robertson, Elaine Holmes, John C Lindon, Jeremy K Nicholson.   

Abstract

As part of our ongoing development of methods for enhanced biomarker information recovery from spectroscopic data we present the first example of a new hetero-nuclear statistical total correlation spectroscopy (HET-STOCSY) approach applied to intact tissue samples collected as part of a toxicological study. One-dimensional 1H and 31P-{1H} magic angle spinning (MAS) NMR spectra of intact liver samples after galactosamine (galN) treatment to rats and after cotreatment of galN plus uridine were collected at 275 K. Individual samples were also followed by 1H and 31P-{1H} MAS NMR through time generating time dependent modulations in metabolite signatures relating to toxicity. High-resolution 1H NMR spectra of urine and plasma and clinical chemical data were also collected to establish a biological framework in which to place these novel statistical heterospectroscopic data. In HET-STOCSY, calculation of the covariance between the 31P-{1H} and 1H NMR signals of phosphorus containing metabolites allows their molecular connectivities to be established and the construction of virtual two-dimensional heteronuclear correlation spectra that connect all protons on the molecule to the heteroatom. We show how HET-STOCSY applied to MAS NMR spectra of liver samples can be used to augment biomarker detection. This approach is generic and can be applied to correlate the covarying signals for any spin-active nuclei where there is parallel or serial collection of data.

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Year:  2007        PMID: 17973499     DOI: 10.1021/ac0713961

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  7 in total

1.  High-resolution magic-angle-spinning NMR spectroscopy for metabolic profiling of intact tissues.

Authors:  Olaf Beckonert; Muireann Coen; Hector C Keun; Yulan Wang; Timothy M D Ebbels; Elaine Holmes; John C Lindon; Jeremy K Nicholson
Journal:  Nat Protoc       Date:  2010-05-13       Impact factor: 13.491

2.  Ratio analysis nuclear magnetic resonance spectroscopy for selective metabolite identification in complex samples.

Authors:  Siwei Wei; Jian Zhang; Lingyan Liu; Tao Ye; G A Nagana Gowda; Fariba Tayyari; Daniel Raftery
Journal:  Anal Chem       Date:  2011-09-23       Impact factor: 6.986

3.  Metabolic profiling and population screening of analgesic usage in nuclear magnetic resonance spectroscopy-based large-scale epidemiologic studies.

Authors:  Ruey Leng Loo; Muireann Coen; Timothy Ebbels; Olivier Cloarec; Elaine Maibaum; Magda Bictash; Ivan Yap; Paul Elliott; Jeremiah Stamler; Jeremy K Nicholson; Elaine Holmes
Journal:  Anal Chem       Date:  2009-07-01       Impact factor: 6.986

4.  NMR in metabolomics and natural products research: two sides of the same coin.

Authors:  Steven L Robinette; Rafael Brüschweiler; Frank C Schroeder; Arthur S Edison
Journal:  Acc Chem Res       Date:  2011-09-02       Impact factor: 22.384

5.  ¹³C NMR metabolomics: applications at natural abundance.

Authors:  Chaevien S Clendinen; Brittany Lee-McMullen; Caroline M Williams; Gregory S Stupp; Krista Vandenborne; Daniel A Hahn; Glenn A Walter; Arthur S Edison
Journal:  Anal Chem       Date:  2014-08-29       Impact factor: 6.986

6.  A comprehensive characterisation of the metabolic profile of varicose veins; implications in elaborating plausible cellular pathways for disease pathogenesis.

Authors:  Muzaffar A Anwar; Kyrillos N Adesina-Georgiadis; K Spagou; P A Vorkas; J V Li; Joseph Shalhoub; Elaine Holmes; Alun H Davies
Journal:  Sci Rep       Date:  2017-06-07       Impact factor: 4.379

7.  Pitfalls to be considered on the metabolomic analysis of biological samples by HR-MAS.

Authors:  Vicent Esteve; Beatriz Martínez-Granados; M Carmen Martínez-Bisbal
Journal:  Front Chem       Date:  2014-05-30       Impact factor: 5.221

  7 in total

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