Literature DB >> 17965706

Complete genome sequence of the myxobacterium Sorangium cellulosum.

Susanne Schneiker1, Olena Perlova, Olaf Kaiser, Klaus Gerth, Aysel Alici, Matthias O Altmeyer, Daniela Bartels, Thomas Bekel, Stefan Beyer, Edna Bode, Helge B Bode, Christoph J Bolten, Jomuna V Choudhuri, Sabrina Doss, Yasser A Elnakady, Bettina Frank, Lars Gaigalat, Alexander Goesmann, Carolin Groeger, Frank Gross, Lars Jelsbak, Lotte Jelsbak, Jörn Kalinowski, Carsten Kegler, Tina Knauber, Sebastian Konietzny, Maren Kopp, Lutz Krause, Daniel Krug, Bukhard Linke, Taifo Mahmud, Rosa Martinez-Arias, Alice C McHardy, Michelle Merai, Folker Meyer, Sascha Mormann, Jose Muñoz-Dorado, Juana Perez, Silke Pradella, Shwan Rachid, Günter Raddatz, Frank Rosenau, Christian Rückert, Florenz Sasse, Maren Scharfe, Stephan C Schuster, Garret Suen, Anke Treuner-Lange, Gregory J Velicer, Frank-Jörg Vorhölter, Kira J Weissman, Roy D Welch, Silke C Wenzel, David E Whitworth, Susanne Wilhelm, Christoph Wittmann, Helmut Blöcker, Alfred Pühler, Rolf Müller.   

Abstract

The genus Sorangium synthesizes approximately half of the secondary metabolites isolated from myxobacteria, including the anti-cancer metabolite epothilone. We report the complete genome sequence of the model Sorangium strain S. cellulosum So ce56, which produces several natural products and has morphological and physiological properties typical of the genus. The circular genome, comprising 13,033,779 base pairs, is the largest bacterial genome sequenced to date. No global synteny with the genome of Myxococcus xanthus is apparent, revealing an unanticipated level of divergence between these myxobacteria. A large percentage of the genome is devoted to regulation, particularly post-translational phosphorylation, which probably supports the strain's complex, social lifestyle. This regulatory network includes the highest number of eukaryotic protein kinase-like kinases discovered in any organism. Seventeen secondary metabolite loci are encoded in the genome, as well as many enzymes with potential utility in industry.

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Year:  2007        PMID: 17965706     DOI: 10.1038/nbt1354

Source DB:  PubMed          Journal:  Nat Biotechnol        ISSN: 1087-0156            Impact factor:   54.908


  125 in total

1.  Intra- and interprotein phosphorylation between two-hybrid histidine kinases controls Myxococcus xanthus developmental progression.

Authors:  Andreas Schramm; Bongsoo Lee; Penelope I Higgs
Journal:  J Biol Chem       Date:  2012-06-01       Impact factor: 5.157

2.  Biogeography and phylogenetic diversity of a cluster of exclusively marine myxobacteria.

Authors:  Thorsten Brinkhoff; Doreen Fischer; John Vollmers; Sonja Voget; Christine Beardsley; Sebastian Thole; Marc Mussmann; Brigitte Kunze; Irene Wagner-Döbler; Rolf Daniel; Meinhard Simon
Journal:  ISME J       Date:  2011-12-22       Impact factor: 10.302

Review 3.  Myxobacteria, polarity, and multicellular morphogenesis.

Authors:  Dale Kaiser; Mark Robinson; Lee Kroos
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-07-07       Impact factor: 10.005

4.  Characterization and engineering of a novel pyrroloquinoline quinone dependent glucose dehydrogenase from Sorangium cellulosum So ce56.

Authors:  Michael Hofer; Kathrin Bönsch; Thomas Greiner-Stöffele; Meike Ballschmiter
Journal:  Mol Biotechnol       Date:  2011-03       Impact factor: 2.695

5.  Characterization of 3'-Phosphate RNA Ligase Paralogs RtcB1, RtcB2, and RtcB3 from Myxococcus xanthus Highlights DNA and RNA 5'-Phosphate Capping Activity of RtcB3.

Authors:  William P Maughan; Stewart Shuman
Journal:  J Bacteriol       Date:  2015-09-08       Impact factor: 3.490

6.  The consequences of genetic drift for bacterial genome complexity.

Authors:  Chih-Horng Kuo; Nancy A Moran; Howard Ochman
Journal:  Genome Res       Date:  2009-06-05       Impact factor: 9.043

Review 7.  Activating the expression of bacterial cryptic genes by rpoB mutations in RNA polymerase or by rare earth elements.

Authors:  Kozo Ochi; Yukinori Tanaka; Shigeo Tojo
Journal:  J Ind Microbiol Biotechnol       Date:  2013-10-15       Impact factor: 3.346

8.  Are there lateral as well as polar engines for A-motile gliding in myxobacteria?

Authors:  Dale Kaiser
Journal:  J Bacteriol       Date:  2009-07-06       Impact factor: 3.490

9.  Myxococcus xanthus Pph2 is a manganese-dependent protein phosphatase involved in energy metabolism.

Authors:  Raquel García-Hernández; Aurelio Moraleda-Muñoz; Alfredo Castañeda-García; Juana Pérez; José Muñoz-Dorado
Journal:  J Biol Chem       Date:  2009-08-25       Impact factor: 5.157

10.  Identification of the Treponema pallidum subsp. pallidum TP0092 (RpoE) regulon and its implications for pathogen persistence in the host and syphilis pathogenesis.

Authors:  Lorenzo Giacani; Oleg Denisenko; Martin Tompa; Arturo Centurion-Lara
Journal:  J Bacteriol       Date:  2012-12-14       Impact factor: 3.490

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