Literature DB >> 17965198

TetraploidMap for Windows: linkage map construction and QTL mapping in autotetraploid species.

Christine Anne Hackett1, Iain Milne, John E Bradshaw, Zewei Luo.   

Abstract

An earlier program, TetraploidMap, enabled linkage analysis to be performed for autotetraploid species, with a text-based input and output. The current program, TetraploidMap for Windows, is considerably enhanced, and now goes beyond linkage analysis to perform quantitative trait locus (QTL) interval mapping, with a range of models and thresholds assessed by permutation tests. A Windows-based interface facilitates data entry and exploration. TetraploidMap for Windows is freely available from the Web site of Bioinformatics and Statistics Scotland at http://www.bioss.ac.uk/ (user-friendly software).

Mesh：

Year:  2007        PMID： 17965198     DOI： 10.1093/jhered/esm086

Source DB:  PubMed          Journal:  J Hered        ISSN： 0022-1503            Impact factor:   2.645


  24 in total

1.  QTL mapping of internal heat necrosis in tetraploid potato.

Authors:  P H McCord; B R Sosinski; K G Haynes; M E Clough; G C Yencho
Journal:  Theor Appl Genet       Date:  2010-08-28       Impact factor: 5.699

2.  Molecular characterisation of resistance against potato wart races 1, 2, 6 and 18 in a tetraploid population of potato (Solanum tuberosum subsp. tuberosum).

Authors:  Jennifer Groth; Yesu Song; Adolf Kellermann; Andrea Schwarzfischer
Journal:  J Appl Genet       Date:  2013-02-24       Impact factor: 3.240

3.  Development of diagnostic markers for use in breeding potatoes resistant to Globodera pallida pathotype Pa2/3 using germplasm derived from Solanum tuberosum ssp. andigena CPC 2802.

Authors:  Claire Moloney; Denis Griffin; Peter W Jones; Glenn J Bryan; Karen McLean; John E Bradshaw; Dan Milbourne
Journal:  Theor Appl Genet       Date:  2009-11-01       Impact factor: 5.699

4.  A major QTL located on chromosome V associates with in vitro tuberization in a tetraploid potato population.

Authors:  Jun Zhou; Hui Fang; Jianwei Shan; Xiaoxi Gao; Lin Chen; Conghua Xie; Tingting Xie; Jun Liu
Journal:  Mol Genet Genomics       Date:  2014-03-12       Impact factor: 3.291

5.  Origin of C. latifolia and C. aurantiifolia triploid limes: the preferential disomic inheritance of doubled-diploid 'Mexican' lime is consistent with an interploid hybridization hypothesis.

Authors:  H Rouiss; F Bakry; Y Froelicher; L Navarro; P Aleza; P Ollitrault
Journal:  Ann Bot       Date:  2018-03-05       Impact factor: 4.357

Review 6.  Improving breeding efficiency in potato using molecular and quantitative genetics.

Authors:  Anthony T Slater; Noel O I Cogan; Benjamin J Hayes; Lee Schultz; M Finlay B Dale; Glenn J Bryan; John W Forster
Journal:  Theor Appl Genet       Date:  2014-09-04       Impact factor: 5.699

7.  Genetic map of the primocane-fruiting and thornless traits of tetraploid blackberry.

Authors:  P Castro; E T Stafne; J R Clark; K S Lewers
Journal:  Theor Appl Genet       Date:  2013-07-16       Impact factor: 5.699

8.  SSR-enriched genetic linkage maps of bermudagrass (Cynodon dactylon × transvaalensis), and their comparison with allied plant genomes.

Authors:  Sameer Khanal; Changsoo Kim; Susan A Auckland; Lisa K Rainville; Jeevan Adhikari; Brian M Schwartz; Andrew H Paterson
Journal:  Theor Appl Genet       Date:  2017-02-06       Impact factor: 5.699

9.  Linkage map construction and QTL analysis for internal heat necrosis in autotetraploid potato.

Authors:  Mitchell J Schumann; Zhao-Bang Zeng; Mark E Clough; G Craig Yencho
Journal:  Theor Appl Genet       Date:  2017-06-26       Impact factor: 5.699

10.  A rapid marker ordering approach for high-density genetic linkage maps in experimental autotetraploid populations using multidimensional scaling.

Authors:  K F Preedy; C A Hackett
Journal:  Theor Appl Genet       Date:  2016-08-09       Impact factor: 5.699
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