Literature DB >> 17964930

Differential scanning calorimetry.

Charles H Spink1.   

Abstract

Differential scanning calorimetry (DSC) has emerged as a powerful experimental technique for determining thermodynamic properties of biomacromolecules. The ability to monitor unfolding or phase transitions in proteins, polynucleotides, and lipid assemblies has not only provided data on thermodynamic stability for these important molecules, but also made it possible to examine the details of unfolding processes and to analyze the characteristics of intermediate states involved in the melting of biopolymers. The recent improvements in DSC instrumentation and software have generated new opportunities for the study of the effects of structure and changes in environment on the behavior of proteins, nucleic acids, and lipids. This review presents some of the details of application of DSC to the examination of the unfolding of biomolecules. After a brief introduction to DSC instrumentation used for the study of thermal transitions, the methods for obtaining basic thermodynamic information from the DSC curve are presented. Then, using DNA unfolding as an example, methods for the analysis of the melting transition are presented that allow deconvolution of the DSC curves to determine more subtle characteristics of the intermediate states involved in unfolding. Two types of transitions are presented for analysis, the first example being the unfolding of two large synthetic polynucleotides, which display high cooperativity in the melting process. The second example shows the application of DSC for the study of the unfolding of a simple hairpin oligonucleotide. Details of the data analysis are presented in a simple spreadsheet format.

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Year:  2008        PMID: 17964930     DOI: 10.1016/S0091-679X(07)84005-2

Source DB:  PubMed          Journal:  Methods Cell Biol        ISSN: 0091-679X            Impact factor:   1.441


  23 in total

1.  TRF2 promotes, remodels and protects telomeric Holliday junctions.

Authors:  Anaïs Poulet; Rémi Buisson; Cendrine Faivre-Moskalenko; Mélanie Koelblen; Simon Amiard; Fabien Montel; Santiago Cuesta-Lopez; Olivier Bornet; Françoise Guerlesquin; Thomas Godet; Julien Moukhtar; Françoise Argoul; Anne-Cécile Déclais; David M J Lilley; Stephen C Y Ip; Stephen C West; Eric Gilson; Marie-Josèphe Giraud-Panis
Journal:  EMBO J       Date:  2009-02-05       Impact factor: 11.598

2.  Detection of early unfolding events in a dimeric protein by amide proton exchange and native electrospray mass spectrometry.

Authors:  James A Mobley; Anton Poliakov
Journal:  Protein Sci       Date:  2009-08       Impact factor: 6.725

3.  Thermodynamics of forming a parallel DNA crossover.

Authors:  Charles H Spink; Liang Ding; Qingyi Yang; Richard D Sheardy; Nadrian C Seeman
Journal:  Biophys J       Date:  2009-07-22       Impact factor: 4.033

4.  Preliminary use of differential scanning calorimetry of cerebrospinal fluid for the diagnosis of glioblastoma multiforme.

Authors:  Alexis A Chagovetz; Randy L Jensen; Larry Recht; Michael Glantz; Alexander M Chagovetz
Journal:  J Neurooncol       Date:  2011-07-01       Impact factor: 4.130

5.  Accelerated molecular dynamics simulation analysis of MSI-594 in a lipid bilayer.

Authors:  Shruti Mukherjee; Rajiv K Kar; Ravi Prakash Reddy Nanga; Kamal H Mroue; Ayyalusamy Ramamoorthy; Anirban Bhunia
Journal:  Phys Chem Chem Phys       Date:  2017-07-26       Impact factor: 3.676

Review 6.  Application and use of differential scanning calorimetry in studies of thermal fluctuation associated with amyloid fibril formation.

Authors:  Kenji Sasahara; Yuji Goto
Journal:  Biophys Rev       Date:  2012-11-13

7.  Cross-platform comparison of nucleic acid hybridization: toward quantitative reference standards.

Authors:  Ken Halvorsen; Paul F Agris
Journal:  Anal Biochem       Date:  2014-08-12       Impact factor: 3.365

8.  Thermodynamic and structural analysis of human NFU conformational chemistry.

Authors:  Jingwei Li; Shu Ding; J A Cowan
Journal:  Biochemistry       Date:  2013-07-15       Impact factor: 3.162

9.  Structure and stability of higher-order human telomeric quadruplexes.

Authors:  Luigi Petraccone; Charles Spink; John O Trent; Nichola C Garbett; Chongkham S Mekmaysy; Concetta Giancola; Jonathan B Chaires
Journal:  J Am Chem Soc       Date:  2011-12-01       Impact factor: 15.419

10.  G-register exchange dynamics in guanine quadruplexes.

Authors:  Robert W Harkness; Anthony K Mittermaier
Journal:  Nucleic Acids Res       Date:  2016-04-07       Impact factor: 16.971

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