Literature DB >> 17964926

Binding: a polemic and rough guide.

Nichola C Garbett1, Jonathan B Chaires.   

Abstract

Binding is at the center of all of biology with cellular events being mediated by a huge array of highly orchestrated, coupled binding interactions. In order to approach a detailed understanding of the molecular forces that drive these interactions, it is essential to obtain thermodynamic information. A huge body of work already exists that describes the concepts and mathematical tools that are at the foundation of current thermodynamic techniques. The purpose of this chapter is to aid the reader in understanding how to apply the available technologies in extracting meaningful thermodynamic information for binding systems.

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Year:  2008        PMID: 17964926     DOI: 10.1016/S0091-679X(07)84001-5

Source DB:  PubMed          Journal:  Methods Cell Biol        ISSN: 0091-679X            Impact factor:   1.441


  9 in total

1.  Isothermal titration calorimetry (ITC): a standard operating procedure (SOP).

Authors:  Margarida Bastos; Adrian Velazquez-Campoy
Journal:  Eur Biophys J       Date:  2021-03-04       Impact factor: 1.733

2.  A Discovery Funnel for Nucleic Acid Binding Drug Candidates.

Authors:  Patrick A Holt; Robert Buscaglia; John O Trent; Jonathan B Chaires
Journal:  Drug Dev Res       Date:  2011-03-01       Impact factor: 4.360

3.  Crystal structures of Λ-[Ru(phen)₂dppz]²⁺ with oligonucleotides containing TA/TA and AT/AT steps show two intercalation modes.

Authors:  Hakan Niyazi; James P Hall; Kyra O'Sullivan; Graeme Winter; Thomas Sorensen; John M Kelly; Christine J Cardin
Journal:  Nat Chem       Date:  2012-06-24       Impact factor: 24.427

4.  Intercalative pyrimido[4',5':4,5]thieno(2,3-b)quinolines induce apoptosis in leukemic cells: a comparative study of methoxy and morpholino substitution.

Authors:  M S Shahabuddin; Mridula Nambiar; Gopal M Advirao; Sathees C Raghavan
Journal:  Invest New Drugs       Date:  2010-04-28       Impact factor: 3.850

5.  Evaluation of molecular descriptors for antitumor drugs with respect to noncovalent binding to DNA and antiproliferative activity.

Authors:  José Portugal
Journal:  BMC Pharmacol       Date:  2009-09-16

6.  Binding of Ru(bpy)2(eilatin)2+ to matched and mismatched DNA.

Authors:  Brian M Zeglis; Jacqueline K Barton
Journal:  Inorg Chem       Date:  2008-06-25       Impact factor: 5.165

7.  Cooperativity in Binding Processes: New Insights from Phenomenological Modeling.

Authors:  Diego I Cattoni; Osvaldo Chara; Sergio B Kaufman; F Luis González Flecha
Journal:  PLoS One       Date:  2015-12-30       Impact factor: 3.240

Review 8.  Recent developments in the chemistry of deoxyribonucleic acid (DNA) intercalators: principles, design, synthesis, applications and trends.

Authors:  Brenno A D Neto; Alexandre A M Lapis
Journal:  Molecules       Date:  2009-05-07       Impact factor: 4.411

9.  The shaping of a molecular linguist: How a career studying DNA energetics revealed the language of molecular communication.

Authors:  Kenneth J Breslauer
Journal:  J Biol Chem       Date:  2021-04-07       Impact factor: 5.157

  9 in total

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