Literature DB >> 17964105

Amplification of ST50 gene using dry-reagent-based polymerase chain reaction for the detection of Salmonella typhi.

Ismail Aziah1, Manickam Ravichandran, Asma Ismail.   

Abstract

Conventional polymerase chain reaction (PCR) testing requires many pipetting steps and has to be transported and stored in cold chain. To overcome these limitations, we designed a ready-to-use PCR test for Salmonella typhi using PCR reagents, primers against the ST50 gene of S. typhi, a built-in internal amplification control (IAC), and gel loading dye mixed and freeze-dried in a single tube. The 2-step dry-reagent-based assay was used to amplify a 1238-bp target gene and an 810-bp IAC gene from 73 BACTEC blood culture broths (33 true positives for S. typhi and 40 true negatives for non-S. typhi). The sensitivity, specificity, positive predictive value, and negative predictive value of the PCR assay were 87.9%, 100%, 100%, and 90.9%, respectively. We suggest that this rapid 2-step PCR test could be used for the rapid diagnosis of typhoid fever.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 17964105     DOI: 10.1016/j.diagmicrobio.2007.05.014

Source DB:  PubMed          Journal:  Diagn Microbiol Infect Dis        ISSN: 0732-8893            Impact factor:   2.803


  15 in total

1.  Rapid multi sample DNA amplification using rotary-linear polymerase chain reaction device (PCRDisc).

Authors:  D Sugumar; L X Kong; Asma Ismail; M Ravichandran; Lee Su Yin
Journal:  Biomicrofluidics       Date:  2012-03-14       Impact factor: 2.800

2.  Multiplex PCR assay and lyophilization for detection of Salmonella spp., Staphylococcus aureus and Bacillus cereus in pork products.

Authors:  Narong Arunrut; Wansika Kiatpathomchai; Chiraporn Ananchaipattana
Journal:  Food Sci Biotechnol       Date:  2018-01-25       Impact factor: 2.391

Review 3.  Epidemiology, Clinical Presentation, Laboratory Diagnosis, Antimicrobial Resistance, and Antimicrobial Management of Invasive Salmonella Infections.

Authors:  John A Crump; Maria Sjölund-Karlsson; Melita A Gordon; Christopher M Parry
Journal:  Clin Microbiol Rev       Date:  2015-10       Impact factor: 26.132

4.  Reliable means of diagnosis and serovar determination of blood-borne Salmonella strains: quick PCR amplification of unique genomic loci by novel primer sets.

Authors:  Arvindhan Govindasamy Nagarajan; Guruswamy Karnam; Amit Lahiri; Uday Sankar Allam; Dipshikha Chakravortty
Journal:  J Clin Microbiol       Date:  2009-06-17       Impact factor: 5.948

5.  Leapfrog diagnostics: Demonstration of a broad spectrum pathogen identification platform in a resource-limited setting.

Authors:  Tomasz A Leski; Rashid Ansumana; Anthony P Malanoski; David H Jimmy; Umaru Bangura; Brian R Barrows; Morie Alpha; Bashiru M Koroma; Nina C Long; Abu J Sundufu; Alfred S Bockarie; Baochuan Lin; David A Stenger
Journal:  Health Res Policy Syst       Date:  2012-07-04

6.  Sample-ready multiplex qPCR assay for detection of malaria.

Authors:  Edwin Kamau; Saba Alemayehu; Karla C Feghali; Dennis W Juma; George M Blackstone; William R Marion; Peter Obare; Bernhards Ogutu; Christian F Ockenhouse
Journal:  Malar J       Date:  2014-04-25       Impact factor: 2.979

7.  Non-protein coding RNA genes as the novel diagnostic markers for the discrimination of Salmonella species using PCR.

Authors:  Ravichantar Nithya; Siti Aminah Ahmed; Chee-Hock Hoe; Subash C B Gopinath; Marimuthu Citartan; Suresh V Chinni; Li Pin Lee; Timofey S Rozhdestvensky; Thean-Hock Tang
Journal:  PLoS One       Date:  2015-03-16       Impact factor: 3.240

8.  Immunoprotectivity of Salmonella enterica serovar Enteritidis virulence protein, InvH, against Salmonella typhi.

Authors:  Behzad Dehghani; Iraj Rasooli; Mohammadreza Jalali-Nadoushan; Parviz Owlia; Zohreh Rasooli
Journal:  Iran J Basic Med Sci       Date:  2014-08       Impact factor: 2.699

9.  A Meta-Analysis of Typhoid Diagnostic Accuracy Studies: A Recommendation to Adopt a Standardized Composite Reference.

Authors:  Helen L Storey; Ying Huang; Chris Crudder; Allison Golden; Tala de los Santos; Kenneth Hawkins
Journal:  PLoS One       Date:  2015-11-13       Impact factor: 3.240

10.  Rapid detection of Salmonella Typhi by loop-mediated isothermal amplification (LAMP) method.

Authors:  J Abdullah; N Saffie; F A R Sjasri; A Husin; Z Abdul-Rahman; A Ismail; I Aziah; M Mohamed
Journal:  Braz J Microbiol       Date:  2015-03-04       Impact factor: 2.476

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.