Literature DB >> 17963728

Structural and functional studies on Ribonuclease S, retro S and retro-inverso S peptides.

Ipsita Pal-Bhowmick1, Ramendra Pati Pandey, Gotam K Jarori, Santosh Kar, Dinkar Sahal.   

Abstract

Ribonuclease S peptide and S protein offer a unique complementation system to understand the finer features of molecular recognition. In the present study the S peptide (1-16), and its retro and retro-inverso analogs have been analyzed for their structural and biological attributes. RPHPLC, CD, and NMR analyses have revealed that the physicochemical and conformational properties of the S peptide are distinct from those of its retro and retro-inverso analogs. On the functional side, while the S peptide complemented the S protein to give RNase activity, was recognized by anti-S peptide antibodies and induced T cell proliferation, neither the retro nor the retro-inverso S peptides could do so.

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Year:  2007        PMID: 17963728     DOI: 10.1016/j.bbrc.2007.10.056

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  6 in total

1.  Limitations of peptide retro-inverso isomerization in molecular mimicry.

Authors:  Chong Li; Marzena Pazgier; Jing Li; Changqing Li; Min Liu; Guozhang Zou; Zhenyu Li; Jiandong Chen; Sergey G Tarasov; Wei-Yue Lu; Wuyuan Lu
Journal:  J Biol Chem       Date:  2010-04-09       Impact factor: 5.157

2.  Integrating the intrinsic conformational preferences of noncoded α-amino acids modified at the peptide bond into the noncoded amino acids database.

Authors:  Guillem Revilla-López; Francisco Rodríguez-Ropero; David Curcó; Juan Torras; M Isabel Calaza; David Zanuy; Ana I Jiménez; Carlos Cativiela; Ruth Nussinov; Carlos Alemán
Journal:  Proteins       Date:  2011-04-12

3.  An algorithm to find all palindromic sequences in proteins.

Authors:  N Prasanth; M Kirti Vaishnavi; K Sekar
Journal:  J Biosci       Date:  2013-03       Impact factor: 1.826

4.  Functional consequences of retro-inverso isomerization of a miniature protein inhibitor of the p53-MDM2 interaction.

Authors:  Chong Li; Changyou Zhan; Le Zhao; Xishan Chen; Wei-Yue Lu; Wuyuan Lu
Journal:  Bioorg Med Chem       Date:  2013-04-22       Impact factor: 3.641

5.  Retro-MoRFs: identifying protein binding sites by normal and reverse alignment and intrinsic disorder prediction.

Authors:  Bin Xue; A Keith Dunker; Vladimir N Uversky
Journal:  Int J Mol Sci       Date:  2010-09-29       Impact factor: 5.923

6.  A tale of two symmetrical tails: structural and functional characteristics of palindromes in proteins.

Authors:  Armita Sheari; Mehdi Kargar; Ali Katanforoush; Shahriar Arab; Mehdi Sadeghi; Hamid Pezeshk; Changiz Eslahchi; Sayed-Amir Marashi
Journal:  BMC Bioinformatics       Date:  2008-06-11       Impact factor: 3.169

  6 in total

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