Literature DB >> 17960116

Identification of mutations in UBIAD1 following exclusion of coding mutations in the chromosome 1p36 locus for Schnyder crystalline corneal dystrophy.

Vivek S Yellore1, M Ali Khan, Nirit Bourla, Sylvia A Rayner, Michael C Chen, Baris Sonmez, Rominder S Momi, Kapil M Sampat, Michael B Gorin, Anthony J Aldave.   

Abstract

PURPOSE: To identify the genetic basis of Schnyder crystalline corneal dystrophy (SCCD) through screening positional candidate genes and UBIAD1, in which mutations have been associated with SCCD, in affected families.
METHODS: The coding region of each of the 16 positional candidate genes for which mutation screening has not been previously reported was screened with polymerase chain reaction (PCR) amplification and automated sequencing in four affected individuals from two families with SCCD. In addition, the coding region of UBIAD1, located just outside of the originally described SCCD candidate interval on chromosome 1p36, was directly sequenced in affected and unaffected individuals from three families with SCCD.
RESULTS: Eighteen novel and 15 previously reported sequence variants were identified in 10 of the 16 positional candidate genes. Only two of the sequence variants segregated with the affected phenotype in either of the families screened. Both were novel single nucleotide polymorphisms (SNPs) predicted to result in synonymous amino acid substitutions in different predicted genes. However, one of these SNPs was also identified in control individuals, and the other SNP was not predicted to alter splicing. Screening of UBIAD1 revealed a different missense mutation in each of the three unrelated probands that was screened: p.Asn102Ser, p.Arg119Gly, and p.Leu121Val. Screening of the affected and unaffected relatives of the probands in whom the p.Asn102Ser and p.Leu121Val mutations were identified demonstrated that each mutation segregated with the affected phenotype. None of the three missense mutations was identified in 110 control individuals.
CONCLUSIONS: No presumed pathogenic coding region mutations were identified in the genes mapped to the candidate region for SCCD. However, missense mutations in UBIAD1, located just outside of the originally described SCCD fine mapped region, were identified in each of the three families with SCCD, confirming that mutations in UBIAD1 are associated with SCCD.

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Year:  2007        PMID: 17960116

Source DB:  PubMed          Journal:  Mol Vis        ISSN: 1090-0535            Impact factor:   2.367


  17 in total

1.  Apparent autosomal dominant keratoconus in a large Australian pedigree accounted for by digenic inheritance of two novel loci.

Authors:  Kathryn P Burdon; Douglas J Coster; Jac C Charlesworth; Richard A Mills; Kate J Laurie; Cecilia Giunta; Alex W Hewitt; Paul Latimer; Jamie E Craig
Journal:  Hum Genet       Date:  2008-09-05       Impact factor: 4.132

2.  The UBIAD1 prenyltransferase links menaquinone-4 [corrected] synthesis to cholesterol metabolic enzymes.

Authors:  Michael L Nickerson; Allen D Bosley; Jayne S Weiss; Brittany N Kostiha; Yoshihisa Hirota; Wolfgang Brandt; Dominic Esposito; Shigeru Kinoshita; Ludger Wessjohann; Scott G Morham; Thorkell Andresson; Howard S Kruth; Toshio Okano; Michael Dean
Journal:  Hum Mutat       Date:  2012-11-27       Impact factor: 4.878

3.  A novel UBIAD1 mutation identified in a Chinese family with Schnyder crystalline corneal dystrophy.

Authors:  Yang Jing; Chun Liu; Junmin Xu; Liya Wang
Journal:  Mol Vis       Date:  2009-07-29       Impact factor: 2.367

4.  UBIAD1 mutation alters a mitochondrial prenyltransferase to cause Schnyder corneal dystrophy.

Authors:  Michael L Nickerson; Brittany N Kostiha; Wolfgang Brandt; William Fredericks; Ke-Ping Xu; Fu-Shin Yu; Bert Gold; James Chodosh; Marc Goldberg; Da Wen Lu; Masakazu Yamada; Timo M Tervo; Richard Grutzmacher; Chris Croasdale; Maria Hoeltzenbein; John Sutphin; S Bruce Malkowicz; Ludger Wessjohann; Howard S Kruth; Michael Dean; Jayne S Weiss
Journal:  PLoS One       Date:  2010-05-21       Impact factor: 3.240

5.  Exclusion of positional candidate gene coding region mutations in the common posterior polymorphous corneal dystrophy 1 candidate gene interval.

Authors:  Anthony J Aldave; Vivek S Yellore; Rosalind C Vo; Khairidzan M Kamal; Sylvia A Rayner; Christopher L Plaisier; Michael C Chen; Mausam R Damani; Michele N Pham; Michael B Gorin; Eric Sobel; Jeanette Papp
Journal:  Cornea       Date:  2009-08       Impact factor: 2.651

Review 6.  Characteristics of corneal dystrophies: a review from clinical, histological and genetic perspectives.

Authors:  Ze-Nan Lin; Jie Chen; Hong-Ping Cui
Journal:  Int J Ophthalmol       Date:  2016-06-18       Impact factor: 1.779

Review 7.  The IC3D classification of the corneal dystrophies.

Authors:  Jayne S Weiss; H U Møller; Walter Lisch; Shigeru Kinoshita; Anthony J Aldave; Michael W Belin; Tero Kivelä; Massimo Busin; Francis L Munier; Berthold Seitz; John Sutphin; Cecilie Bredrup; Mark J Mannis; Christopher J Rapuano; Gabriel Van Rij; Eung Kweon Kim; Gordon K Klintworth
Journal:  Cornea       Date:  2008-12       Impact factor: 2.651

8.  Schnyder Corneal Dystrophy in a Saudi Arabian Family with Heterozygous UBIAD1 Mutation (p.L121F).

Authors:  Huda Al-Ghadeer; Jawahir Y Mohamed; Arif O Khan
Journal:  Middle East Afr J Ophthalmol       Date:  2011-01

9.  Down-regulation of TERE1/UBIAD1 activated Ras-MAPK signalling and induced cell proliferation.

Authors:  Yanzhi Xia; Xiong Wei; Shimin Wu; Bo Wang; Ximing Wang; Ling Hong
Journal:  Cell Biol Int Rep (2010)       Date:  2010-11-08

10.  Ubiad1 is an antioxidant enzyme that regulates eNOS activity by CoQ10 synthesis.

Authors:  Vera Mugoni; Ruben Postel; Valeria Catanzaro; Elisa De Luca; Emilia Turco; Giuseppe Digilio; Lorenzo Silengo; Michael P Murphy; Claudio Medana; Didier Y R Stainier; Jeroen Bakkers; Massimo M Santoro
Journal:  Cell       Date:  2013-01-31       Impact factor: 41.582

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