Literature DB >> 17956876

NAPROC-13: a database for the dereplication of natural product mixtures in bioassay-guided protocols.

José Luis López-Pérez1, Roberto Therón, Esther del Olmo, David Díaz.   

Abstract

MOTIVATION: Although natural products represent a reservoir of molecular diversity, the process of isolating and identifying active compounds is a bottleneck in drug discovery programs. The rapid isolation and identification of the bioactive component(s) of natural product mixtures during the bioassay-guided fractionation have become crucial factors in the competition with chemical compound libraries and combinatorial synthetic efforts. In this respect, the use of spectral databases in identification processes is indispensable.
RESULTS: We have developed a database containing (13)C spectral information of over 6000 natural compounds, which allows for fast identifications of known compounds present in the crude extracts and provides insight into the structural elucidation of unknown compounds. AVAILABILITY: http://c13.usal.es

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Year:  2007        PMID: 17956876     DOI: 10.1093/bioinformatics/btm516

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  17 in total

1.  Dereplications can amplify the extent and worth of traditional pharmacopeias.

Authors:  Memory Elvin-Lewis
Journal:  Afr J Tradit Complement Altern Med       Date:  2011-07-03

2.  Integrative Approaches for the Identification and Localization of Specialized Metabolites in Tripterygium Roots.

Authors:  B Markus Lange; Justin T Fischedick; Malte F Lange; Narayanan Srividya; Dunja Šamec; Brenton C Poirier
Journal:  Plant Physiol       Date:  2016-11-18       Impact factor: 8.340

Review 3.  High Resolution NMR Spectroscopy as a Structural and Analytical Tool for Unsaturated Lipids in Solution.

Authors:  Eleni Alexandri; Raheel Ahmed; Hina Siddiqui; Muhammad I Choudhary; Constantinos G Tsiafoulis; Ioannis P Gerothanassis
Journal:  Molecules       Date:  2017-10-05       Impact factor: 4.411

4.  Two new triterpenoids from Photinia serrulata.

Authors:  Yaling Song; Yuehu Wang; Qing Lu; Jinming Gao; Minggang Bi; Yongxian Cheng
Journal:  Molecules       Date:  2007-12-20       Impact factor: 4.411

Review 5.  Microbial natural product databases: moving forward in the multi-omics era.

Authors:  Jeffrey A van Santen; Satria A Kautsar; Marnix H Medema; Roger G Linington
Journal:  Nat Prod Rep       Date:  2020-08-28       Impact factor: 13.423

Review 6.  Open-access metabolomics databases for natural product research: present capabilities and future potential.

Authors:  Sean R Johnson; Bernd Markus Lange
Journal:  Front Bioeng Biotechnol       Date:  2015-03-04

Review 7.  Natural Products Diversity of Marine Ascidians (Tunicates; Ascidiacea) and Successful Drugs in Clinical Development.

Authors:  Satheesh Kumar Palanisamy; N M Rajendran; Angela Marino
Journal:  Nat Prod Bioprospect       Date:  2017-01-17

8.  CamMedNP: building the Cameroonian 3D structural natural products database for virtual screening.

Authors:  Fidele Ntie-Kang; James A Mbah; Luc Meva'a Mbaze; Lydia L Lifongo; Michael Scharfe; Joelle Ngo Hanna; Fidelis Cho-Ngwa; Pascal Amoa Onguéné; Luc C Owono Owono; Eugene Megnassan; Wolfgang Sippl; Simon M N Efange
Journal:  BMC Complement Altern Med       Date:  2013-04-16       Impact factor: 3.659

Review 9.  Marketed marine natural products in the pharmaceutical and cosmeceutical industries: tips for success.

Authors:  Ana Martins; Helena Vieira; Helena Gaspar; Susana Santos
Journal:  Mar Drugs       Date:  2014-02-17       Impact factor: 5.118

10.  Natural products chemistry: The emerging trends and prospective goals.

Authors:  Riaz A Khan
Journal:  Saudi Pharm J       Date:  2018-02-07       Impact factor: 4.330

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