Literature DB >> 1795179

Comparative conformational analysis of [D-Pen2,D-Pen5]enkephalin (DPDPE): a molecular mechanics study.

B C Wilkes1, P W Schiller.   

Abstract

A theoretical conformational analysis (molecular mechanics study) of the delta opioid receptor-selective enkephalin analog H-Tyr-D-Pen-Gly-Phe-D-Pen-OH (DPDPE) was performed, based on the use of the SYBYL software. The study led to the identification of several conformers that were significantly lower in energy than previously reported candidate conformers of DPDPE which, for comparative purposes, were also minimized by using the standard SYBYL force field. The results revealed a considerable degree of conformational flexibility of the DPDPE molecule, and suggested that incorporation of further conformational constraints into this enkephalin analog will be necessary in order to elucidate its receptor-bound conformation.

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Year:  1991        PMID: 1795179     DOI: 10.1007/BF00126664

Source DB:  PubMed          Journal:  J Comput Aided Mol Des        ISSN: 0920-654X            Impact factor:   3.686


  18 in total

1.  Application of the message-address concept in the design of highly potent and selective non-peptide delta opioid receptor antagonists.

Authors:  P S Portoghese; M Sultana; H Nagase; A E Takemori
Journal:  J Med Chem       Date:  1988-02       Impact factor: 7.446

2.  A model for the delta-receptor-bound conformation of enkephalin.

Authors:  G V Nikiforovich; J Balodis
Journal:  FEBS Lett       Date:  1988-01-25       Impact factor: 4.124

3.  Theoretical conformational analysis of a mu-selective cyclic opioid peptide analog.

Authors:  B C Wilkes; P W Schiller
Journal:  Biopolymers       Date:  1987-08       Impact factor: 2.505

4.  Computer-aided, systematic search of peptide conformations constrained by NMR data.

Authors:  G M Smith; D F Veber
Journal:  Biochem Biophys Res Commun       Date:  1986-01-29       Impact factor: 3.575

5.  1H-n.m.r. investigation of conformational features of cyclic, penicillamine-containing enkephalin analogs.

Authors:  H I Mosberg
Journal:  Int J Pept Protein Res       Date:  1987-02

6.  Disulphide bridges in globular proteins.

Authors:  J M Thornton
Journal:  J Mol Biol       Date:  1981-09-15       Impact factor: 5.469

7.  Conformational search in enkephalin analogues containing a disulfide bond.

Authors:  M Froimowitz
Journal:  Biopolymers       Date:  1990       Impact factor: 2.505

8.  Conformation-activity relationships of cyclic dermorphin analogues.

Authors:  B C Wilkes; P W Schiller
Journal:  Biopolymers       Date:  1990-01       Impact factor: 2.505

9.  1H n.m.r. investigation of conformational features of cyclic enkephalinamide analogs.

Authors:  H I Mosberg; P W Schiller
Journal:  Int J Pept Protein Res       Date:  1984-05

10.  Bis-penicillamine enkephalins possess highly improved specificity toward delta opioid receptors.

Authors:  H I Mosberg; R Hurst; V J Hruby; K Gee; H I Yamamura; J J Galligan; T F Burks
Journal:  Proc Natl Acad Sci U S A       Date:  1983-10       Impact factor: 11.205

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  2 in total

1.  Comparison of cyclic delta-opioid peptides with non-peptide delta-agonist spiroindanyloxymorphone (SIOM) using the message-address concept: a molecular modeling study.

Authors:  P Gao
Journal:  J Comput Aided Mol Des       Date:  1996-08       Impact factor: 3.686

2.  Opioid receptor three-dimensional structures from distance geometry calculations with hydrogen bonding constraints.

Authors:  I D Pogozheva; A L Lomize; H I Mosberg
Journal:  Biophys J       Date:  1998-08       Impact factor: 4.033

  2 in total

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