Literature DB >> 17951693

Genetic transformation: a tool to study protein targeting in diatoms.

Peter G Kroth1.   

Abstract

Diatoms are unicellular photoautotrophic eukaryotes that play an important role in ecology by fixing large amounts of CO2 in the oceans. Because they evolved by secondary endocytobiosis-- a process of uptake of a eukaryotic alga into another eukaryotic cell--they have a rather unusual cell biology and genetic constitution. Because the preparation of organelles is rather difficult as a result of the cytosolic structures, genetic transformation and expression of preproteins fused to green fluorescent protein (GFP) became one of the major tools to analyze subcellular localization of proteins in diatoms. Meanwhile several groups successfully attempted to develop genetic transformation protocols for diatoms. These methods are based on "biolistic" DNA delivery via a particle gun and allow the introduction and expression of foreign genes in the algae. Here a protocol for the genetic transformation of the diatom Phaeodactylum tricornutum is described as well as the subsequent characterization of the transformants.

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Year:  2007        PMID: 17951693

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  18 in total

Review 1.  Physical methods of nucleic acid transfer: general concepts and applications.

Authors:  Julien Villemejane; Lluis M Mir
Journal:  Br J Pharmacol       Date:  2009-01-21       Impact factor: 8.739

2.  The transcription factor bZIP14 regulates the TCA cycle in the diatom Phaeodactylum tricornutum.

Authors:  Michiel Matthijs; Michele Fabris; Toshihiro Obata; Imogen Foubert; José Manuel Franco-Zorrilla; Roberto Solano; Alisdair R Fernie; Wim Vyverman; Alain Goossens
Journal:  EMBO J       Date:  2017-04-18       Impact factor: 11.598

3.  Reduction in carotenoid levels in the marine diatom Phaeodactylum tricornutum by artificial microRNAs targeted against the endogenous phytoene synthase gene.

Authors:  Simrat Kaur; Charles Spillane
Journal:  Mar Biotechnol (NY)       Date:  2014-09-05       Impact factor: 3.619

4.  Genome Editing in Diatoms Using CRISPR-Cas to Induce Precise Bi-allelic Deletions.

Authors:  Amanda Hopes; Vladimir Nekrasov; Nigel Belshaw; Irina Grouneva; Sophien Kamoun; Thomas Mock
Journal:  Bio Protoc       Date:  2017-12-05

5.  Characterization of a trimeric light-harvesting complex in the diatom Phaeodactylum tricornutum built of FcpA and FcpE proteins.

Authors:  Jidnyasa Joshi-Deo; Matthias Schmidt; Ansgar Gruber; Wolfram Weisheit; Maria Mittag; Peter G Kroth; Claudia Büchel
Journal:  J Exp Bot       Date:  2010-05-17       Impact factor: 6.992

6.  Diatom plastids depend on nucleotide import from the cytosol.

Authors:  Michelle Ast; Ansgar Gruber; Stephan Schmitz-Esser; Horst Ekkehard Neuhaus; Peter G Kroth; Matthias Horn; Ilka Haferkamp
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-12       Impact factor: 11.205

7.  Silencing of the violaxanthin de-epoxidase gene in the diatom Phaeodactylum tricornutum reduces diatoxanthin synthesis and non-photochemical quenching.

Authors:  Johann Lavaud; Arne C Materna; Sabine Sturm; Sascha Vugrinec; Peter G Kroth
Journal:  PLoS One       Date:  2012-05-18       Impact factor: 3.240

8.  Gene silencing in the marine diatom Phaeodactylum tricornutum.

Authors:  Valentina De Riso; Raffaella Raniello; Florian Maumus; Alessandra Rogato; Chris Bowler; Angela Falciatore
Journal:  Nucleic Acids Res       Date:  2009-05-31       Impact factor: 16.971

9.  Protein targeting into complex diatom plastids: functional characterisation of a specific targeting motif.

Authors:  Ansgar Gruber; Sascha Vugrinec; Franziska Hempel; Sven B Gould; Uwe-G Maier; Peter G Kroth
Journal:  Plant Mol Biol       Date:  2007-05-05       Impact factor: 4.335

10.  A novel type of light-harvesting antenna protein of red algal origin in algae with secondary plastids.

Authors:  Sabine Sturm; Johannes Engelken; Ansgar Gruber; Sascha Vugrinec; Peter G Kroth; Iwona Adamska; Johann Lavaud
Journal:  BMC Evol Biol       Date:  2013-07-30       Impact factor: 3.260

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