Literature DB >> 17951384

Gene-specific regulation by a transcript cleavage factor: facilitating promoter escape.

Ann Hochschild1.   

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Year:  2007        PMID： 17951384      PMCID： PMC2168596          DOI： 10.1128/JB.01611-07

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


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  30 in total

1.  Transcript cleavage factors GreA and GreB act as transient catalytic components of RNA polymerase.

Authors:  Oleg Laptenko; Jookyung Lee; Ivan Lomakin; Sergei Borukhov
Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

2.  Structure and function of the transcription elongation factor GreB bound to bacterial RNA polymerase.

Authors:  Natacha Opalka; Mark Chlenov; Pablo Chacon; William J Rice; Willy Wriggers; Seth A Darst
Journal:  Cell       Date:  2003-08-08       Impact factor: 41.582

3.  Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage.

Authors:  Hubert Kettenberger; Karim-Jean Armache; Patrick Cramer
Journal:  Cell       Date:  2003-08-08       Impact factor: 41.582

4.  GreA protein: a transcription elongation factor from Escherichia coli.

Authors:  S Borukhov; A Polyakov; V Nikiforov; A Goldfarb
Journal:  Proc Natl Acad Sci U S A       Date:  1992-10-01       Impact factor: 11.205

Review 5.  Regulation of RNA polymerase through the secondary channel.

Authors:  Bryce E Nickels; Ann Hochschild
Journal:  Cell       Date:  2004-08-06       Impact factor: 41.582

6.  DksA: a critical component of the transcription initiation machinery that potentiates the regulation of rRNA promoters by ppGpp and the initiating NTP.

Authors:  Brian J Paul; Melanie M Barker; Wilma Ross; David A Schneider; Cathy Webb; John W Foster; Richard L Gourse
Journal:  Cell       Date:  2004-08-06       Impact factor: 41.582

7.  Regulation through the secondary channel--structural framework for ppGpp-DksA synergism during transcription.

Authors:  Anna Perederina; Vladimir Svetlov; Marina N Vassylyeva; Tahir H Tahirov; Shigeyuki Yokoyama; Irina Artsimovitch; Dmitry G Vassylyev
Journal:  Cell       Date:  2004-08-06       Impact factor: 41.582

8.  Transcript cleavage factors from E. coli.

Authors:  S Borukhov; V Sagitov; A Goldfarb
Journal:  Cell       Date:  1993-02-12       Impact factor: 41.582

9.  Donation of catalytic residues to RNA polymerase active center by transcription factor Gre.

Authors:  Ekaterina Sosunova; Vasily Sosunov; Maxim Kozlov; Vadim Nikiforov; Alex Goldfarb; Arkady Mustaev
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-10       Impact factor: 11.205

10.  Unified two-metal mechanism of RNA synthesis and degradation by RNA polymerase.

Authors:  Vasily Sosunov; Ekaterina Sosunova; Arkady Mustaev; Irina Bass; Vadim Nikiforov; Alex Goldfarb
Journal:  EMBO J       Date:  2003-05-01       Impact factor: 11.598
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  6 in total

1.  Transcription factor GreA contributes to resolving promoter-proximal pausing of RNA polymerase in Bacillus subtilis cells.

Authors:  Yoko Kusuya; Ken Kurokawa; Shu Ishikawa; Naotake Ogasawara; Taku Oshima
Journal:  J Bacteriol       Date:  2011-04-22       Impact factor: 3.490

Review 2.  Mechanisms and evolution of control logic in prokaryotic transcriptional regulation.

Authors:  Sacha A F T van Hijum; Marnix H Medema; Oscar P Kuipers
Journal:  Microbiol Mol Biol Rev       Date:  2009-09       Impact factor: 11.056

3.  Crystal structure of Escherichia coli Rnk, a new RNA polymerase-interacting protein.

Authors:  Valerie Lamour; Steven T Rutherford; Konstantin Kuznedelov; Udupi A Ramagopal; Richard L Gourse; Konstantin Severinov; Seth A Darst
Journal:  J Mol Biol       Date:  2008-08-12       Impact factor: 5.469

4.  ANNOgesic: a Swiss army knife for the RNA-seq based annotation of bacterial/archaeal genomes.

Authors:  Sung-Huan Yu; Jörg Vogel; Konrad U Förstner
Journal:  Gigascience       Date:  2018-09-01       Impact factor: 6.524

5.  Wolbachia transcription elongation factor "Wol GreA" interacts with α2ββ'σ subunits of RNA polymerase through its dimeric C-terminal domain.

Authors:  Jeetendra Kumar Nag; Nidhi Shrivastava; Dhanvantri Chahar; Chhedi Lal Gupta; Preeti Bajpai; Shailja Misra-Bhattacharya
Journal:  PLoS Negl Trop Dis       Date:  2014-06-19

6.  The prevalence and implications of single nucleotide polymorphisms in genes encoding the RNA polymerase of clinical isolates of Staphylococcus aureus.

Authors:  Aishwarya Krishna; Bing Liu; Sharon J Peacock; Sivaramesh Wigneshweraraj
Journal:  Microbiologyopen       Date:  2020-05-17       Impact factor: 3.139
  6 in total

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