Literature DB >> 1794972

1H and 15N NMR study of human lysozyme.

T Ohkubo1, Y Taniyama, M Kikuchi.   

Abstract

The 15N signal assignment of human lysozyme was carried out by using 1H-1H and 1H-15N two dimensional experiments. To solve the severe overlap problem of the NH signals, uniform labeling of the protein with 15N was introduced. The uniformly 15N labeled protein was prepared using a high-expression system of Saccharomyces cerevisiae. From the analyses of 1H and 15N NMR spectra, all of the backbone 15N signals of the molecule were assigned to each specific residue in the amino acid sequence. Recently published proton signal assignments [Redfield & Dobson (1990) Biochemistry, 29, 7201-7214] were confirmed by these complementary data. In addition, assignments were extended to side chain 15NH2 groups of asparagine and glutamine. Elements of secondary structure were deduced from the pattern of sequential and medium-range NOE connectivities. Two beta-sheets and four alpha-helices could be identified in the protein, which were in good agreement with those determined by X-ray crystallography. The interaction between human lysozyme and its inhibitor N-acetyl-chitotriose was investigated by 15N-1H HMQC spectra. Most of the 15N-NH cross-peaks in the spectra were separated well enough to be followed during the titration experiment. Residues whose NH proton signals decrease in intensity upon complex formation, are located mainly around subsites B, C, and D. Local conformational changes were observed around the fourth helix adjacent to the cleft of human lysozyme.

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Year:  1991        PMID: 1794972     DOI: 10.1093/oxfordjournals.jbchem.a123672

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  6 in total

1.  Characterization of the structure and dynamics of amyloidogenic variants of human lysozyme by NMR spectroscopy.

Authors:  A K Chamberlain; V Receveur; A Spencer; C Redfield; C M Dobson
Journal:  Protein Sci       Date:  2001-12       Impact factor: 6.725

2.  A non-natural variant of human lysozyme (I59T) mimics the in vitro behaviour of the I56T variant that is responsible for a form of familial amyloidosis.

Authors:  Christine L Hagan; Russell J K Johnson; Anne Dhulesia; Mireille Dumoulin; Janice Dumont; Erwin De Genst; John Christodoulou; Carol V Robinson; Christopher M Dobson; Janet R Kumita
Journal:  Protein Eng Des Sel       Date:  2010-04-09       Impact factor: 1.650

3.  Assignments of 1H, 13C, and 15N resonances of human lysozyme at 4 degrees C.

Authors:  Hiroyuki Kumeta; Yoshihiro Kobashigawa; Kazunori Miura; Yoshiyuki Nishimiya; Chitoshi Oka; Nobuaki Nemoto; Ai Miura; Katsutoshi Nitta; Sakae Tsuda
Journal:  J Biomol NMR       Date:  2002-02       Impact factor: 2.835

4.  Assignment of 1H and 15N resonances of mouse lysozyme M.

Authors:  T Obita; T Ueda; Y Tanaka; Y Hashimoto; T Imoto
Journal:  J Biomol NMR       Date:  2000-12       Impact factor: 2.835

5.  Analysis of the internal motion of free and ligand-bound human lysozyme by use of 15N NMR relaxation measurement: a comparison with those of hen lysozyme.

Authors:  S Mine; T Ueda; Y Hashimoto; T Imoto
Journal:  Protein Sci       Date:  2000-09       Impact factor: 6.725

6.  Structure of a low-population intermediate state in the release of an enzyme product.

Authors:  Alfonso De Simone; Francesco A Aprile; Anne Dhulesia; Christopher M Dobson; Michele Vendruscolo
Journal:  Elife       Date:  2015-01-09       Impact factor: 8.140

  6 in total

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