Literature DB >> 17947409

Using crossover breakpoints in recombinant inbred lines to identify quantitative trait loci controlling the global recombination frequency.

Elisabeth Esch1, Jessica M Szymaniak, Heather Yates, Wojciech P Pawlowski, Edward S Buckler.   

Abstract

Recombination is a crucial component of evolution and breeding, producing new genetic combinations on which selection can act. Rates of recombination vary tremendously, not only between species but also within species and for specific chromosomal segments. In this study, by examining recombination events captured in recombinant inbred mapping populations previously created for maize, wheat, Arabidopsis, and mouse, we demonstrate that substantial variation exists for genomewide crossover rates in both outcrossed and inbred plant and animal species. We also identify quantitative trait loci (QTL) that control this variation. The method that we developed and employed here holds promise for elucidating factors that regulate meiotic recombination and for creation of hyperrecombinogenic lines, which can help overcome limited recombination that hampers breeding progress.

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Year:  2007        PMID: 17947409      PMCID: PMC2147985          DOI: 10.1534/genetics.107.080622

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  33 in total

1.  Recombination is proportional to the number of chromosome arms in mammals.

Authors:  F Pardo-Manuel de Villena; C Sapienza
Journal:  Mamm Genome       Date:  2001-04       Impact factor: 2.957

2.  Molecular characterization of meiotic recombination across the 140-kb multigenic a1-sh2 interval of maize.

Authors:  Hong Yao; Qing Zhou; Jin Li; Heather Smith; Marna Yandeau; Basil J Nikolau; Patrick S Schnable
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-16       Impact factor: 11.205

Review 3.  Distribution of meiotic recombination sites.

Authors:  Bernard de Massy
Journal:  Trends Genet       Date:  2003-09       Impact factor: 11.639

4.  Genetics. Motivating hotspots.

Authors:  Molly Przeworski
Journal:  Science       Date:  2005-10-14       Impact factor: 47.728

Review 5.  Double-stranded DNA breaks and gene functions in recombination and meiosis.

Authors:  Wuxing Li; Hong Ma
Journal:  Cell Res       Date:  2006-05       Impact factor: 25.617

6.  Variation in chiasma frequency among eight accessions of Arabidopsis thaliana.

Authors:  E Sanchez-Moran; S J Armstrong; J L Santos; F C H Franklin; G H Jones
Journal:  Genetics       Date:  2002-11       Impact factor: 4.562

7.  A linkage map based on information from four F2 populations of maize (Zea mays L.).

Authors:  W D Beavis; D Grant
Journal:  Theor Appl Genet       Date:  1991-10       Impact factor: 5.699

8.  Variability of recombination frequencies in the Iowa Stiff Stalk Synthetic (Zea mays L.).

Authors:  A Fatmi; C G Poneleit; T W Pfeiffer
Journal:  Theor Appl Genet       Date:  1993-08       Impact factor: 5.699

9.  High-resolution crossover maps for each bivalent of Zea mays using recombination nodules.

Authors:  Lorinda K Anderson; Gregory G Doyle; Brian Brigham; Jenna Carter; Kristina D Hooker; Ann Lai; Mindy Rice; Stephen M Stack
Journal:  Genetics       Date:  2003-10       Impact factor: 4.562

10.  Comparative recombination distances among Zea mays L. inbreds, wide crosses and interspecific hybrids.

Authors:  C G Williams; M M Goodman; C W Stuber
Journal:  Genetics       Date:  1995-12       Impact factor: 4.562

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  34 in total

1.  Crossovers get a boost in Brassica allotriploid and allotetraploid hybrids.

Authors:  Martine Leflon; Laurie Grandont; Frédérique Eber; Virginie Huteau; Olivier Coriton; Liudmila Chelysheva; Eric Jenczewski; Anne-Marie Chèvre
Journal:  Plant Cell       Date:  2010-07-09       Impact factor: 11.277

2.  Whole genome approaches to identify early meiotic gene candidates in cereals.

Authors:  William D Bovill; Priyanka Deveshwar; Sanjay Kapoor; Jason A Able
Journal:  Funct Integr Genomics       Date:  2008-10-04       Impact factor: 3.410

3.  Juxtaposition of heterozygous and homozygous regions causes reciprocal crossover remodelling via interference during Arabidopsis meiosis.

Authors:  Piotr A Ziolkowski; Luke E Berchowitz; Christophe Lambing; Nataliya E Yelina; Xiaohui Zhao; Krystyna A Kelly; Kyuha Choi; Liliana Ziolkowska; Viviana June; Eugenio Sanchez-Moran; Chris Franklin; Gregory P Copenhaver; Ian R Henderson
Journal:  Elife       Date:  2015-03-27       Impact factor: 8.140

Review 4.  MAGIC populations in crops: current status and future prospects.

Authors:  B Emma Huang; Klara L Verbyla; Arunas P Verbyla; Chitra Raghavan; Vikas K Singh; Pooran Gaur; Hei Leung; Rajeev K Varshney; Colin R Cavanagh
Journal:  Theor Appl Genet       Date:  2015-04-09       Impact factor: 5.699

5.  Rapid creation of Arabidopsis doubled haploid lines for quantitative trait locus mapping.

Authors:  Danelle K Seymour; Daniele L Filiault; Isabelle M Henry; Jennifer Monson-Miller; Maruthachalam Ravi; Andy Pang; Luca Comai; Simon W L Chan; Julin N Maloof
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-27       Impact factor: 11.205

6.  Analysis of recombination QTLs, segregation distortion, and epistasis for fitness in maize multiple populations using ultra-high-density markers.

Authors:  Chunhui Li; Yongxiang Li; Yunsu Shi; Yanchun Song; Dengfeng Zhang; Edward S Buckler; Zhiwu Zhang; Yu Li; Tianyu Wang
Journal:  Theor Appl Genet       Date:  2016-07-05       Impact factor: 5.699

7.  Repeated polyploidy drove different levels of crossover suppression between homoeologous chromosomes in Brassica napus allohaploids.

Authors:  Marta Cifuentes; Frédérique Eber; Marie-Odile Lucas; Maryse Lode; Anne-Marie Chèvre; Eric Jenczewski
Journal:  Plant Cell       Date:  2010-07-16       Impact factor: 11.277

8.  Maize genome structure variation: interplay between retrotransposon polymorphisms and genic recombination.

Authors:  Hugo K Dooner; Limei He
Journal:  Plant Cell       Date:  2008-02-22       Impact factor: 11.277

9.  Dynamic genetic features of chromosomes revealed by comparison of soybean genetic and sequence-based physical maps.

Authors:  Woo Kyu Lee; Namshin Kim; Jiwoong Kim; Jung-Kyung Moon; Namhee Jeong; Ik-Young Choi; Sang Cheol Kim; Won-Hyong Chung; Hong Sig Kim; Suk-Ha Lee; Soon-Chun Jeong
Journal:  Theor Appl Genet       Date:  2013-01-10       Impact factor: 5.699

Review 10.  Tinkering with meiosis.

Authors:  Wayne Crismani; Chloé Girard; Raphael Mercier
Journal:  J Exp Bot       Date:  2012-11-07       Impact factor: 6.992

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