Literature DB >> 17947116

Detecting prostatic adenocarcinoma from digitized histology using a multi-scale hierarchical classification approach.

Scott Doyle1, Carlos Rodriguez, Anant Madabhushi, John Tomaszeweski, Michael Feldman.   

Abstract

In this paper we present a computer-aided diagnosis (CAD) system to automatically detect prostatic adenocarcinoma from high resolution digital histopathological slides. This is especially desirable considering the large number of tissue slides that are currently analyzed manually - a laborious and time-consuming task. Our methodology is novel in that texture-based classification is performed using a hierarchical classifier within a multi-scale framework. Pyramidal decomposition is used to reduce an image into its constituent scales. The cascaded image analysis across multiple scales is similar to the manner in which pathologists analyze histopathology. Nearly 600 different image texture features at multiple orientations are extracted at every pixel at each image scale. At each image scale the classifier only analyzes those image pixels that have been determined to be tumor at the preceding lower scale. Results of quantitative evaluation on 20 patient studies indicate (1) an overall accuracy of over 90% and (2) an approximate 8-fold savings in terms of computational time. Both the AdaBoost and Decision Tree classifiers were considered and in both cases tumor detection sensitivity was found to be relatively constant across different scales. Detection specificity was however found to increase at higher scales reflecting the availability of additional discriminatory information.

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Year:  2006        PMID: 17947116     DOI: 10.1109/IEMBS.2006.260188

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  11 in total

Review 1.  Histopathological image analysis: a review.

Authors:  Metin N Gurcan; Laura E Boucheron; Ali Can; Anant Madabhushi; Nasir M Rajpoot; B Yener
Journal:  IEEE Rev Biomed Eng       Date:  2009-10-30

2.  Multiview boosting digital pathology analysis of prostate cancer.

Authors:  Jin Tae Kwak; Stephen M Hewitt
Journal:  Comput Methods Programs Biomed       Date:  2017-02-22       Impact factor: 5.428

3.  HistoQC: An Open-Source Quality Control Tool for Digital Pathology Slides.

Authors:  Andrew Janowczyk; Ren Zuo; Hannah Gilmore; Michael Feldman; Anant Madabhushi
Journal:  JCO Clin Cancer Inform       Date:  2019-04

4.  Attention Layer-Based Multidimensional Feature Extraction for Diagnosis of Lung Cancer.

Authors:  Manisha Bhende; Anuradha Thakare; V Saravanan; K Anbazhagan; Hemant N Patel; Ashok Kumar
Journal:  Biomed Res Int       Date:  2022-07-04       Impact factor: 3.246

5.  Digital pathology image analysis: opportunities and challenges.

Authors:  Anant Madabhushi
Journal:  Imaging Med       Date:  2009

6.  Multi-field-of-view strategy for image-based outcome prediction of multi-parametric estrogen receptor-positive breast cancer histopathology: Comparison to Oncotype DX.

Authors:  Ajay Basavanhally; Michael Feldman; Natalie Shih; Carolyn Mies; John Tomaszewski; Shridar Ganesan; Anant Madabhushi
Journal:  J Pathol Inform       Date:  2012-01-19

7.  Computer-aided identification of prostatic adenocarcinoma: Segmentation of glandular structures.

Authors:  Yahui Peng; Yulei Jiang; Laurie Eisengart; Mark A Healy; Francis H Straus; Ximing J Yang
Journal:  J Pathol Inform       Date:  2011-07-26

Review 8.  How bioinformatics influences health informatics: usage of biomolecular sequences, expression profiles and automated microscopic image analyses for clinical needs and public health.

Authors:  Vladimir Kuznetsov; Hwee Kuan Lee; Sebastian Maurer-Stroh; Maria Judit Molnár; Sandor Pongor; Birgit Eisenhaber; Frank Eisenhaber
Journal:  Health Inf Sci Syst       Date:  2013-01-10

9.  Automated image based prominent nucleoli detection.

Authors:  Choon K Yap; Emarene M Kalaw; Malay Singh; Kian T Chong; Danilo M Giron; Chao-Hui Huang; Li Cheng; Yan N Law; Hwee Kuan Lee
Journal:  J Pathol Inform       Date:  2015-06-23

10.  Fractal analysis and the diagnostic usefulness of silver staining nucleolar organizer regions in prostate adenocarcinoma.

Authors:  Alex Stepan; Cristiana Simionescu; Daniel Pirici; Raluca Ciurea; Claudiu Margaritescu
Journal:  Anal Cell Pathol (Amst)       Date:  2015-08-20       Impact factor: 2.916

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