Literature DB >> 17947070

Hybrid automata as a unifying framework for modeling excitable cells.

P Ye1, E Entcheva, S A Smolka, M R True, R Grosu.   

Abstract

We propose hybrid automata (HA) as a unifying framework for computational models of excitable cells. HA, which combine discrete transition graphs with continuous dynamics, can be naturally used to obtain a piecewise, possibly linear, approximation of a nonlinear excitable-cell model. We first show how HA can be used to efficiently capture the action-potential morphology--as well as reproduce typical excitable-cell characteristics such as refractoriness and restitution--of the dynamic Luo-Rudy model of a guinea-pig ventricular myocyte. We then recast two well-known computational models, Biktashev's and Fenton-Karma, as HA without any loss of expressiveness. Given that HA possess an intuitive graphical representation and are supported by a rich mathematical theory and numerous analysis tools, we argue that they are well positioned as a computational model for biological processes.

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Year:  2006        PMID: 17947070     DOI: 10.1109/IEMBS.2006.259294

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  2 in total

1.  Architecture and inherent robustness of a bacterial cell-cycle control system.

Authors:  Xiling Shen; Justine Collier; David Dill; Lucy Shapiro; Mark Horowitz; Harley H McAdams
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-06       Impact factor: 11.205

2.  Heart Rhythm Insights Into Structural Remodeling in Atrial Tissue: Timed Automata Approach.

Authors:  Danuta Makowiec; Joanna Wdowczyk; Zbigniew R Struzik
Journal:  Front Physiol       Date:  2019-01-14       Impact factor: 4.566

  2 in total

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