Literature DB >> 17946029

A non-parametric Bayesian approach to spike sorting.

Frank Wood1, Sharon Goldwater, Michael J Black.   

Abstract

In this work we present and apply infinite Gaussian mixture modeling, a non-parametric Bayesian method, to the problem of spike sorting. As this approach is Bayesian, it allows us to integrate prior knowledge about the problem in a principled way. Because it is non-parametric we are able to avoid model selection, a difficult problem that most current spike sorting methods do not address. We compare this approach to using penalized log likelihood to select the best from multiple finite mixture models trained by expectation maximization. We show favorable offline sorting results on real data and discuss ways to extend our model to online applications.

Mesh:

Year:  2006        PMID: 17946029     DOI: 10.1109/IEMBS.2006.260700

Source DB:  PubMed          Journal:  Conf Proc IEEE Eng Med Biol Soc        ISSN: 1557-170X


  3 in total

1.  Hierarchical Bayesian modeling and Markov chain Monte Carlo sampling for tuning-curve analysis.

Authors:  Beau Cronin; Ian H Stevenson; Mriganka Sur; Konrad P Körding
Journal:  J Neurophysiol       Date:  2009-11-04       Impact factor: 2.714

Review 2.  Continuing progress of spike sorting in the era of big data.

Authors:  David Carlson; Lawrence Carin
Journal:  Curr Opin Neurobiol       Date:  2019-03-08       Impact factor: 6.627

3.  OpenElectrophy: An Electrophysiological Data- and Analysis-Sharing Framework.

Authors:  Samuel Garcia; Nicolas Fourcaud-Trocmé
Journal:  Front Neuroinform       Date:  2009-05-27       Impact factor: 4.081

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.