Literature DB >> 17939025

Identification and characterization of a single-stranded DNA-binding protein from thermophilic bacteriophage GVE2.

Dahai Wei1, Xiaobo Zhang.   

Abstract

Single-stranded DNA-binding (SSB) proteins are indispensable for survival of almost all known living organisms. Due to their numerous applications in diverse molecular biology and analytical methods, SSB proteins have received increasing research interest. In this investigation, a novel SSB gene was identified from a deep-sea thermophilic bacteriophage Geobacillus virus E2 (GVE2) for the first time. The GVE2 SSB protein shared homologies to known SSB proteins from other species. After recombinant expression in E. coli, the purified SSB protein was used for antibody preparation. The Northern and Western blots showed that the GVE2 SSB gene might be an early viral gene. As revealed by DNA binding assay, the recombinant GVE2 SSB protein had single-stranded DNA binding capacity.

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Year:  2007        PMID: 17939025     DOI: 10.1007/s11262-007-0170-4

Source DB:  PubMed          Journal:  Virus Genes        ISSN: 0920-8569            Impact factor:   2.332


  17 in total

1.  Identification and characterization of single-stranded-DNA-binding proteins from Thermus thermophilus and Thermus aquaticus - new arrangement of binding domains.

Authors:  Sławomir Dabrowski; Marcin Olszewski; Rafał Piatek; Anna Brillowska-Dabrowska; Grazyna Konopa; Jozef Kur
Journal:  Microbiology       Date:  2002-10       Impact factor: 2.777

Review 2.  Single-stranded DNA-binding proteins (SSBs) -- sources and applications in molecular biology.

Authors:  Józef Kur; Marcin Olszewski; Anna Długołecka; Paweł Filipkowski
Journal:  Acta Biochim Pol       Date:  2005-08-04       Impact factor: 2.149

3.  Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined by multiwavelength x-ray diffraction on the selenomethionyl protein at 2.9-A resolution.

Authors:  S Raghunathan; C S Ricard; T M Lohman; G Waksman
Journal:  Proc Natl Acad Sci U S A       Date:  1997-06-24       Impact factor: 11.205

4.  Crystal structure of the large fragment of Thermus aquaticus DNA polymerase I at 2.5-A resolution: structural basis for thermostability.

Authors:  S Korolev; M Nayal; W M Barnes; E Di Cera; G Waksman
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

5.  Protein stabilization by hydrophobic interactions at the surface.

Authors:  B Van den Burg; B W Dijkstra; G Vriend; B Van der Vinne; G Venema; V G Eijsink
Journal:  Eur J Biochem       Date:  1994-03-15

6.  Cloning, over-expression and biochemical characterization of the single-stranded DNA binding protein from Mycobacterium tuberculosis.

Authors:  K Purnapatre; U Varshney
Journal:  Eur J Biochem       Date:  1999-09

7.  Identification and characterization of the single-stranded DNA-binding protein of bacteriophage P1.

Authors:  H Lehnherr; J D Bendtsen; F Preuss; T V Ilyina
Journal:  J Bacteriol       Date:  1999-10       Impact factor: 3.490

8.  A phage single-stranded DNA (ssDNA) binding protein complements ssDNA accumulation of a geminivirus and interferes with viral movement.

Authors:  M Padidam; R N Beachy; C M Fauquet
Journal:  J Virol       Date:  1999-02       Impact factor: 5.103

9.  Identification and properties of the crenarchaeal single-stranded DNA binding protein from Sulfolobus solfataricus.

Authors:  R I Wadsworth; M F White
Journal:  Nucleic Acids Res       Date:  2001-02-15       Impact factor: 16.971

10.  Crystal structure of the Deinococcus radiodurans single-stranded DNA-binding protein suggests a mechanism for coping with DNA damage.

Authors:  Douglas A Bernstein; Julie M Eggington; Michael P Killoran; Ana M Misic; Michael M Cox; James L Keck
Journal:  Proc Natl Acad Sci U S A       Date:  2004-05-24       Impact factor: 11.205

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  4 in total

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Journal:  Appl Environ Microbiol       Date:  2011-12-30       Impact factor: 4.792

2.  Genome analysis of deep-sea thermophilic phage D6E.

Authors:  Yiqian Wang; Xiaobo Zhang
Journal:  Appl Environ Microbiol       Date:  2010-10-01       Impact factor: 4.792

3.  Genome sequence of a novel deep-sea vent epsilonproteobacterial phage provides new insight into the co-evolution of Epsilonproteobacteria and their phages.

Authors:  Yukari Yoshida-Takashima; Yoshihiro Takaki; Shigeru Shimamura; Takuro Nunoura; Ken Takai
Journal:  Extremophiles       Date:  2013-03-20       Impact factor: 2.395

4.  Identification and characterization of a novel thymidylate synthase from deep-sea thermophilic bacteriophage Geobacillus virus E2.

Authors:  Yiqian Wang; Xiaobo Zhang
Journal:  Virus Genes       Date:  2008-07-22       Impact factor: 2.332

  4 in total

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