Literature DB >> 17933542

Emerging trends in molecular recognition: utility of weak aromatic interactions.

Ashish Kumar Tewari1, Rashmi Dubey.   

Abstract

Aromatic interactions play a vital role in chemistry and biology. As about 20% are aromatic in nature, so the role of aromatic interactions become prominent in drug receptor interactions. Not only in drug receptor interactions but also in crystal engineering, protein folding, stacking interactions in DNA/RNA the role of the interactions is of utmost importance. With the emergence of supramolecular chemistry dendrimers, tweezers, rotaxanes, catenanes, and several supramolecular aggregates are associated with aromatic interactions. The mechanism of such interactions is still unknown by the replacement of a small substituent from the aromatic molecule may lead or destroy the interactions. In the present review several models are being discussed with arene interactions under selected heads.

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Year:  2007        PMID: 17933542     DOI: 10.1016/j.bmc.2007.09.023

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  8 in total

1.  Geometries of stacking interactions between phenanthroline ligands in crystal structures of square-planar metal complexes.

Authors:  Goran V Janjić; Predrag V Petrović; Dragan B Ninković; Snežana D Zarić
Journal:  J Mol Model       Date:  2010-12-16       Impact factor: 1.810

2.  Structural analysis of full-length Hfq from Escherichia coli.

Authors:  Mads Beich-Frandsen; Branislav Večerek; Björn Sjöblom; Udo Bläsi; Kristina Djinović-Carugo
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-04-20

3.  An approach to the construction of tailor-made amphiphilic peptides that strongly and selectively bind to hairpin RNA targets.

Authors:  Su Jin Lee; Soonsil Hyun; Jeffrey S Kieft; Jaehoon Yu
Journal:  J Am Chem Soc       Date:  2009-02-18       Impact factor: 15.419

4.  The role of stacking interactions in complexes of proteins with adenine and Guanine fragments of ligands.

Authors:  T V Pyrkov; D V Pyrkova; E D Balitskaya; R G Efremov
Journal:  Acta Naturae       Date:  2009-04       Impact factor: 1.845

5.  Molecular docking study of conformational polymorph: building block of crystal chemistry.

Authors:  Rashmi Dubey; Ashish Kumar Tewari; Ved Prakash Singh; Praveen Singh; Jawahar Singh Dangi; Carmen Puerta; Pedro Valerga; Rajni Kant
Journal:  ScientificWorldJournal       Date:  2013-10-23

6.  Adjustable ellipsoid nanoparticles assembled from re-engineered connectors of the bacteriophage phi29 DNA packaging motor.

Authors:  Feng Xiao; Ying Cai; Joseph Che-Yen Wang; Dominik Green; R Holland Cheng; Borries Demeler; Peixuan Guo
Journal:  ACS Nano       Date:  2009-08-25       Impact factor: 15.881

7.  Introduction of aromatic ring-containing substituents in cyclic nucleotides is associated with inhibition of toxin uptake by the hepatocyte transporters OATP 1B1 and 1B3.

Authors:  Lars Herfindal; Camilla Krakstad; Lene Myhren; Hanne Hagland; Reidun Kopperud; Knut Teigen; Frank Schwede; Rune Kleppe; Stein Ove Døskeland
Journal:  PLoS One       Date:  2014-04-16       Impact factor: 3.240

8.  Structural insights into substrate recognition by the Neurospora Varkud satellite ribozyme: importance of U-turns at the kissing-loop junction.

Authors:  Patricia Bouchard; Pascale Legault
Journal:  Biochemistry       Date:  2013-12-17       Impact factor: 3.162

  8 in total

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