Literature DB >> 17928062

Detecting causality between different frequencies.

Jianhua Wu1, Xuguang Liu, Jianfeng Feng.   

Abstract

Biological systems are usually non-linear and, as a result, the driving signal frequency (say, MHz) is in general not identical with the output frequency (say, N Hz). Coherence and causality analysis have been well-developed to measure the (directional) correlation between input and output signals with identical frequencies (N=M), but they are not applicable to the cases with different frequencies (N not equal M). In this paper, we propose a novel method called frequency-modified causality (coherence) analysis to resolve the issue. The input or output signal is first modulated by up-sampling or down-sampling, coherence and causality analysis are then applied to the frequency modulated and filtered signals. An optimal coherence and causality is found, revealing the true input-output relationship between signals. The method is successfully tested on data generated from a toy model, the van der Pol oscillator and then employed to analyze data recorded from Parkinson's disease (PD) patients.

Entities:  

Mesh:

Year:  2007        PMID: 17928062     DOI: 10.1016/j.jneumeth.2007.08.022

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  9 in total

1.  Analyzing multiple spike trains with nonparametric Granger causality.

Authors:  Aatira G Nedungadi; Govindan Rangarajan; Neeraj Jain; Mingzhou Ding
Journal:  J Comput Neurosci       Date:  2009-01-10       Impact factor: 1.621

2.  Canonical Granger causality between regions of interest.

Authors:  Syed Ashrafulla; Justin P Haldar; Anand A Joshi; Richard M Leahy
Journal:  Neuroimage       Date:  2013-06-27       Impact factor: 6.556

3.  Granger causality vs. dynamic Bayesian network inference: a comparative study.

Authors:  Cunlu Zou; Katherine J Denby; Jianfeng Feng
Journal:  BMC Bioinformatics       Date:  2009-04-24       Impact factor: 3.169

4.  A novel extended Granger Causal Model approach demonstrates brain hemispheric differences during face recognition learning.

Authors:  Tian Ge; Keith M Kendrick; Jianfeng Feng
Journal:  PLoS Comput Biol       Date:  2009-11-20       Impact factor: 4.475

5.  Impact of environmental inputs on reverse-engineering approach to network structures.

Authors:  Jianhua Wu; James L Sinfield; Vicky Buchanan-Wollaston; Jianfeng Feng
Journal:  BMC Syst Biol       Date:  2009-12-04

6.  Beyond element-wise interactions: identifying complex interactions in biological processes.

Authors:  Christophe Ladroue; Shuixia Guo; Keith Kendrick; Jianfeng Feng
Journal:  PLoS One       Date:  2009-09-23       Impact factor: 3.240

7.  Listen to genes: dealing with microarray data in the frequency domain.

Authors:  Jianfeng Feng; Dongyun Yi; Ritesh Krishna; Shuixia Guo; Vicky Buchanan-Wollaston
Journal:  PLoS One       Date:  2009-04-06       Impact factor: 3.240

Review 8.  Uncovering interactions in the frequency domain.

Authors:  Shuixia Guo; Jianhua Wu; Mingzhou Ding; Jianfeng Feng
Journal:  PLoS Comput Biol       Date:  2008-05-30       Impact factor: 4.475

9.  Decomposing neural synchrony: toward an explanation for near-zero phase-lag in cortical oscillatory networks.

Authors:  Rajasimhan Rajagovindan; Mingzhou Ding
Journal:  PLoS One       Date:  2008-11-06       Impact factor: 3.240

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.