Literature DB >> 17926327

Modeling disease incidence data with spatial and spatio temporal dirichlet process mixtures.

Athanasios Kottas1, Jason A Duan, Alan E Gelfand.   

Abstract

Disease incidence or mortality data are typically available as rates or counts for specified regions, collected over time. We propose Bayesian nonparametric spatial modeling approaches to analyze such data. We develop a hierarchical specification using spatial random effects modeled with a Dirichlet process prior. The Dirichlet process is centered around a multivariate normal distribution. This latter distribution arises from a log-Gaussian process model that provides a latent incidence rate surface, followed by block averaging to the areal units determined by the regions in the study. With regard to the resulting posterior predictive inference, the modeling approach is shown to be equivalent to an approach based on block averaging of a spatial Dirichlet process to obtain a prior probability model for the finite dimensional distribution of the spatial random effects. We introduce a dynamic formulation for the spatial random effects to extend the model to spatio-temporal settings. Posterior inference is implemented through Gibbs sampling. We illustrate the methodology with simulated data as well as with a data set on lung cancer incidences for all 88 counties in the state of Ohio over an observation period of 21 years. (c) 2008 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim

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Year:  2008        PMID: 17926327     DOI: 10.1002/bimj.200610375

Source DB:  PubMed          Journal:  Biom J        ISSN: 0323-3847            Impact factor:   2.207


  6 in total

1.  A Bayesian Semiparametric Temporally-Stratified Proportional Hazards Model with Spatial Frailties.

Authors:  Timothy E Hanson; Alejandro Jara; Luping Zhao
Journal:  Bayesian Anal       Date:  2011       Impact factor: 3.728

2.  Space-time latent component modeling of geo-referenced health data.

Authors:  Andrew B Lawson; Hae-Ryoung Song; Bo Cai; Md Monir Hossain; Kun Huang
Journal:  Stat Med       Date:  2010-08-30       Impact factor: 2.373

3.  Spatially dependent polya tree modeling for survival data.

Authors:  Luping Zhao; Timothy E Hanson
Journal:  Biometrics       Date:  2010-08-19       Impact factor: 2.571

4.  Space-time stick-breaking processes for small area disease cluster estimation.

Authors:  Md Monir Hossain; Andrew B Lawson; Bo Cai; Jungsoon Choi; Jihong Liu; Russell S Kirby
Journal:  Environ Ecol Stat       Date:  2013-03-01       Impact factor: 1.119

5.  A multivariate spatial mixture model for areal data: examining regional differences in standardized test scores.

Authors:  Brian Neelon; Alan E Gelfand; Marie Lynn Miranda
Journal:  J R Stat Soc Ser C Appl Stat       Date:  2014-11       Impact factor: 1.864

6.  A Comparison of Spatio-Temporal Disease Mapping Approaches Including an Application to Ischaemic Heart Disease in New South Wales, Australia.

Authors:  Craig Anderson; Louise M Ryan
Journal:  Int J Environ Res Public Health       Date:  2017-02-03       Impact factor: 3.390

  6 in total

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