Literature DB >> 17923123

Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation.

Clement Angkawidjaja1, Dong-ju You, Hiroyoshi Matsumura, Katsumasa Kuwahara, Yuichi Koga, Kazufumi Takano, Shigenori Kanaya.   

Abstract

The crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation was determined at 1.5A resolution. This structure highly resembles that of Serratia marcescens LipA in an open conformation, except for the structures of two lids. Lid1 is anchored by a Ca2+ ion (Ca1) in an open conformation, but lacks this Ca1 site and greatly changes its structure and position in a closed conformation. Lid2 forms a helical hairpin in an open conformation, but does not form it and covers the active site in a closed conformation. Based on these results, we discuss on the lid-opening mechanism.

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Year:  2007        PMID: 17923123     DOI: 10.1016/j.febslet.2007.09.048

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  23 in total

Review 1.  Recombinant Lipases and Phospholipases and Their Use as Biocatalysts for Industrial Applications.

Authors:  Grazia M Borrelli; Daniela Trono
Journal:  Int J Mol Sci       Date:  2015-09-01       Impact factor: 5.923

2.  Minimalist design of water-soluble cross-beta architecture.

Authors:  Matthew Biancalana; Koki Makabe; Shohei Koide
Journal:  Proc Natl Acad Sci U S A       Date:  2010-02-04       Impact factor: 11.205

3.  Monitoring the conformational changes of an intrinsically disordered peptide using a quartz crystal microbalance.

Authors:  Oren Shur; Jun Wu; Donald M Cropek; Scott Banta
Journal:  Protein Sci       Date:  2011-04-08       Impact factor: 6.725

4.  Selection and screening of microbial consortia for efficient and ecofriendly degradation of plastic garbage collected from urban and rural areas of Bangalore, India.

Authors:  Sinosh Skariyachan; M Megha; Meghna Niranjan Kini; Kamath Manali Mukund; Alya Rizvi; Kiran Vasist
Journal:  Environ Monit Assess       Date:  2014-12-13       Impact factor: 2.513

5.  Expression and purification of organic solvent stable lipase from soil metagenomic library.

Authors:  Mahejibin Khan; Kottur Jithesh
Journal:  World J Microbiol Biotechnol       Date:  2012-04-07       Impact factor: 3.312

6.  A vector system for ABC transporter-mediated secretion and purification of recombinant proteins in Pseudomonas species.

Authors:  Jaewook Ryu; Ukjin Lee; Jiye Park; Do-Hyun Yoo; Jung Hoon Ahn
Journal:  Appl Environ Microbiol       Date:  2014-12-29       Impact factor: 4.792

7.  Fine Epitope Mapping of Two Antibodies Neutralizing the Bordetella Adenylate Cyclase Toxin.

Authors:  Xianzhe Wang; James A Stapleton; Justin R Klesmith; Erik L Hewlett; Timothy A Whitehead; Jennifer A Maynard
Journal:  Biochemistry       Date:  2017-02-23       Impact factor: 3.162

8.  Identification and characterization of bacterial cutinase.

Authors:  Sheng Chen; Xing Tong; Ronald W Woodard; Guocheng Du; Jing Wu; Jian Chen
Journal:  J Biol Chem       Date:  2008-07-24       Impact factor: 5.157

9.  Cold-adapted RTX lipase from antarctic Pseudomonas sp. strain AMS8: isolation, molecular modeling and heterologous expression.

Authors:  Mohd Shukuri Mohamad Ali; Menega Ganasen; Raja Noor Zaliha Raja Abd Rahman; Adam Leow Thean Chor; Abu Bakar Salleh; Mahiran Basri
Journal:  Protein J       Date:  2013-04       Impact factor: 2.371

10.  Modeling of solvent-dependent conformational transitions in Burkholderia cepacia lipase.

Authors:  Peter Trodler; Rolf D Schmid; Jürgen Pleiss
Journal:  BMC Struct Biol       Date:  2009-05-28
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