Literature DB >> 17921170

XtalPred: a web server for prediction of protein crystallizability.

Lukasz Slabinski1, Lukasz Jaroszewski, Leszek Rychlewski, Ian A Wilson, Scott A Lesley, Adam Godzik.   

Abstract

UNLABELLED: XtalPred is a web server for prediction of protein crystallizability. The prediction is made by comparing several features of the protein with distributions of these features in TargetDB and combining the results into an overall probability of crystallization. XtalPred provides: (1) a detailed comparison of the protein's features to the corresponding distribution from TargetDB; (2) a summary of protein features and predictions that indicate problems that are likely to be encountered during protein crystallization; (3) prediction of ligands; and (4) (optional) lists of close homologs from complete microbial genomes that are more likely to crystallize. AVAILABILITY: The XtalPred web server is freely available for academic users on http://ffas.burnham.org/XtalPred

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Year:  2007        PMID: 17921170     DOI: 10.1093/bioinformatics/btm477

Source DB:  PubMed          Journal:  Bioinformatics        ISSN: 1367-4803            Impact factor:   6.937


  135 in total

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