Literature DB >> 17920627

Promiscuous stimulation of ParF protein polymerization by heterogeneous centromere binding factors.

Cristina Machón1, Timothy J G Fothergill, Daniela Barillà, Finbarr Hayes.   

Abstract

The segrosome is the nucleoprotein complex that mediates accurate segregation of bacterial plasmids. The segrosome of plasmid TP228 comprises ParF and ParG proteins that assemble on the parH centromere. ParF, which exemplifies one clade of the ubiquitous ParA superfamily of segregation proteins, polymerizes extensively in response to ATP binding. Polymerization is modulated by the ParG centromere binding factor (CBF). The segrosomes of plasmids pTAR, pVT745 and pB171 include ParA homologues of the ParF subgroup, as well as diverse homodimeric CBFs with no primary sequence similarity to ParG, or each other. Centromere binding by these analogues is largely specific. Here, we establish that the ParF homologues of pTAR and pB171 filament modestly with ATP, and that nucleotide hydrolysis is not required for this polymerization, which is more prodigious when the cognate CBF is also present. By contrast, the ParF homologue of plasmid pVT745 did not respond appreciably to ATP alone, but polymerized extensively in the presence of both its cognate CBF and ATP. The co-factors also stimulated nucleotide-independent polymerization of cognate ParF proteins. Moreover, apart from the CBF of pTAR, the disparate ParG analogues promoted polymerization of non-cognate ParF proteins suggesting that filamentation of the ParF proteins is enhanced by a common mechanism. Like ParG, the co-factors may be modular, possessing a centromere-specific interaction domain linked to a flexible region containing determinants that promiscuously stimulate ParF polymerization. The CBFs appear to function as bacterial analogues of formins, microtubule-associated proteins or related ancillary factors that regulate eucaryotic cytoskeletal dynamics.

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Year:  2007        PMID: 17920627     DOI: 10.1016/j.jmb.2007.09.025

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  11 in total

1.  ParA-like protein uses nonspecific chromosomal DNA binding to partition protein complexes.

Authors:  Mark A J Roberts; George H Wadhams; Katie A Hadfield; Susan Tickner; Judith P Armitage
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-10       Impact factor: 11.205

2.  Recruitment of the ParG segregation protein to different affinity DNA sites.

Authors:  Massimiliano Zampini; Andrew Derome; Simon E S Bailey; Daniela Barillà; Finbarr Hayes
Journal:  J Bacteriol       Date:  2009-04-17       Impact factor: 3.490

3.  Evidence for a DNA-relay mechanism in ParABS-mediated chromosome segregation.

Authors:  Hoong Chuin Lim; Ivan Vladimirovich Surovtsev; Bruno Gabriel Beltran; Fang Huang; Jörg Bewersdorf; Christine Jacobs-Wagner
Journal:  Elife       Date:  2014-05-23       Impact factor: 8.140

4.  Breaking and restoring the hydrophobic core of a centromere-binding protein.

Authors:  Sadia Saeed; Thomas A Jowitt; Jim Warwicker; Finbarr Hayes
Journal:  J Biol Chem       Date:  2015-02-23       Impact factor: 5.157

5.  Uncoupling of nucleotide hydrolysis and polymerization in the ParA protein superfamily disrupts DNA segregation dynamics.

Authors:  Aneta Dobruk-Serkowska; Marisa Caccamo; Fernando Rodríguez-Castañeda; Meiyi Wu; Kerstyn Bryce; Irene Ng; Maria A Schumacher; Daniela Barillà; Finbarr Hayes
Journal:  J Biol Chem       Date:  2012-10-23       Impact factor: 5.157

6.  Combinatorial targeting of ribbon-helix-helix artificial transcription factors to chimeric recognition sites.

Authors:  Massimiliano Zampini; Finbarr Hayes
Journal:  Nucleic Acids Res       Date:  2012-04-09       Impact factor: 16.971

7.  Segrosome assembly at the pliable parH centromere.

Authors:  Meiyi Wu; Massimiliano Zampini; Malte Bussiek; Christian Hoischen; Stephan Diekmann; Finbarr Hayes
Journal:  Nucleic Acids Res       Date:  2011-03-04       Impact factor: 16.971

8.  ATP-regulated interactions between P1 ParA, ParB and non-specific DNA that are stabilized by the plasmid partition site, parS.

Authors:  James C Havey; Anthony G Vecchiarelli; Barbara E Funnell
Journal:  Nucleic Acids Res       Date:  2011-09-28       Impact factor: 16.971

9.  A three-dimensional ParF meshwork assembles through the nucleoid to mediate plasmid segregation.

Authors:  Brett N McLeod; Gina E Allison-Gamble; Madhuri T Barge; Nam K Tonthat; Maria A Schumacher; Finbarr Hayes; Daniela Barillà
Journal:  Nucleic Acids Res       Date:  2017-04-07       Impact factor: 16.971

10.  Genome Segregation by the Venus Flytrap Mechanism: Probing the Interaction Between the ParF ATPase and the ParG Centromere Binding Protein.

Authors:  Marisa Caccamo; Aneta Dobruk-Serkowska; Fernando Rodríguez-Castañeda; Cecilia Pennica; Daniela Barillà; Finbarr Hayes
Journal:  Front Mol Biosci       Date:  2020-06-16
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