Literature DB >> 17919600

Macromolecular crowding increases structural content of folded proteins.

Michael Perham1, Loren Stagg, Pernilla Wittung-Stafshede.   

Abstract

Here we show that increased amount of secondary structure is acquired in the folded states of two structurally-different proteins (alpha-helical VlsE and alpha/beta flavodoxin) in the presence of macromolecular crowding agents. The structural content of flavodoxin and VlsE is enhanced by 33% and 70%, respectively, in 400 mg/ml Ficoll 70 (pH 7, 20 degrees C) and correlates with higher protein-thermal stability. In the same Ficoll range, there are only small effects on the unfolded-state structures of the proteins. This is the first in vitro assessment of crowding effects on the native-state structures at physiological conditions. Our findings imply that for proteins with low intrinsic stability, the functional structures in vivo may differ from those observed in dilute buffers.

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Year:  2007        PMID: 17919600     DOI: 10.1016/j.febslet.2007.09.049

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  28 in total

1.  Favourable influence of hydrophobic surfaces on protein structure in porous organically-modified silica glasses.

Authors:  Bouzid Menaa; Mar Herrero; Vicente Rives; Mayya Lavrenko; Daryl K Eggers
Journal:  Biomaterials       Date:  2008-03-24       Impact factor: 12.479

2.  Crowded, cell-like environment induces shape changes in aspherical protein.

Authors:  Dirar Homouz; Michael Perham; Antonios Samiotakis; Margaret S Cheung; Pernilla Wittung-Stafshede
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-12       Impact factor: 11.205

3.  Macromolecular crowding modulates folding mechanism of alpha/beta protein apoflavodoxin.

Authors:  Dirar Homouz; Loren Stagg; Pernilla Wittung-Stafshede; Margaret S Cheung
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

4.  In-cell infrared difference spectroscopy of LOV photoreceptors reveals structural responses to light altered in living cells.

Authors:  Lukas Goett-Zink; Jessica L Klocke; Lena A K Bögeholz; Tilman Kottke
Journal:  J Biol Chem       Date:  2020-06-24       Impact factor: 5.157

Review 5.  Effects of macromolecular crowding agents on protein folding in vitro and in silico.

Authors:  Alexander Christiansen; Qian Wang; Margaret S Cheung; Pernilla Wittung-Stafshede
Journal:  Biophys Rev       Date:  2013-02-19

6.  The extracellular protein VlsE is destabilized inside cells.

Authors:  Irisbel Guzman; Hannah Gelman; Jonathan Tai; Martin Gruebele
Journal:  J Mol Biol       Date:  2013-09-04       Impact factor: 5.469

7.  Crowding effects on the small, fast-folding protein lambda6-85.

Authors:  Sharlene Denos; Apratim Dhar; Martin Gruebele
Journal:  Faraday Discuss       Date:  2012       Impact factor: 4.008

8.  Residue-level interrogation of macromolecular crowding effects on protein stability.

Authors:  Lisa M Charlton; Christopher O Barnes; Conggang Li; Jillian Orans; Gregory B Young; Gary J Pielak
Journal:  J Am Chem Soc       Date:  2008-05-07       Impact factor: 15.419

9.  Thermodynamic and structural characterization of an antibody gel.

Authors:  Osigwe Esue; Anna X Xie; Tim J Kamerzell; Thomas W Patapoff
Journal:  MAbs       Date:  2013-02-20       Impact factor: 5.857

10.  Modulation of calmodulin plasticity by the effect of macromolecular crowding.

Authors:  Dirar Homouz; Hugo Sanabria; M Neal Waxham; Margaret S Cheung
Journal:  J Mol Biol       Date:  2009-07-03       Impact factor: 5.469

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