Literature DB >> 17913877

Sticky overhangs enhance siRNA-mediated gene silencing.

Anne-Laure Bolcato-Bellemin1, Marie-Elise Bonnet, Gaëlle Creusat, Patrick Erbacher, Jean-Paul Behr.   

Abstract

siRNA delivery to cells offers a convenient and powerful means of gene silencing that bypasses several barriers met by gene delivery. However, nonviral vectors, and especially polymers, form looser complexes with siRNA than with plasmid DNA. As a consequence, exchange of siRNA for larger polymeric anions such as proteoglycans found outside cells and at their surface may occur and lower delivery. We show here that making siRNAs "gene-like," via short complementary A(5-8)/T(5-8) 3' overhangs, increases complex stability, and hence RNase protection and gene silencing in vitro up to 10-fold. After decomplexation in the cytoplasm, sticky siRNA (ssiRNA) concatemers fall apart. ssiRNAs are therefore not inducing antiviral responses, as shown by the absence of IFN-beta production. Finally, transfection experiments in the mouse lung show that ssiRNA should be particularly suited to silencing with linear polyethylenimine in vivo.

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Year:  2007        PMID: 17913877      PMCID: PMC2042160          DOI: 10.1073/pnas.0707831104

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  28 in total

Review 1.  Antiviral applications of RNAi.

Authors:  Kevin V Morris; John J Rossi
Journal:  Curr Opin Mol Ther       Date:  2006-04

2.  No induction of anti-viral responses in human cell lines HeLa and MCF-7 when transfecting with siRNA or siLNA.

Authors:  Cecilia Dahlgren; Claes Wahlestedt; Håkan Thonberg
Journal:  Biochem Biophys Res Commun       Date:  2006-01-30       Impact factor: 3.575

Review 3.  Gene silencing through RNA interference (RNAi) in vivo: strategies based on the direct application of siRNAs.

Authors:  Achim Aigner
Journal:  J Biotechnol       Date:  2006-01-18       Impact factor: 3.307

4.  Structure of DNA-cationic liposome complexes: DNA intercalation in multilamellar membranes in distinct interhelical packing regimes.

Authors:  J O Rädler; I Koltover; T Salditt; C R Safinya
Journal:  Science       Date:  1997-02-07       Impact factor: 47.728

5.  Dilution of reporter gene with stuffer DNA does not alter the transfection efficiency of polyethylenimines.

Authors:  Antoine Kichler; Christian Leborgne; Olivier Danos
Journal:  J Gene Med       Date:  2005-11       Impact factor: 4.565

6.  Fine structure of heparan sulfate regulates syndecan-1 function and cell behavior.

Authors:  R D Sanderson; J E Turnbull; J T Gallagher; A D Lander
Journal:  J Biol Chem       Date:  1994-05-06       Impact factor: 5.157

7.  Interactions of polymeric and liposomal gene delivery systems with extracellular glycosaminoglycans: physicochemical and transfection studies.

Authors:  M Ruponen; S Ylä-Herttuala; A Urtti
Journal:  Biochim Biophys Acta       Date:  1999-01-08

8.  Evaluation of proinflammatory cytokine production induced by linear and branched polyethylenimine/plasmid DNA complexes in mice.

Authors:  Shigeru Kawakami; Yoshitaka Ito; Pensri Charoensit; Fumiyoshi Yamashita; Mitsuru Hashida
Journal:  J Pharmacol Exp Ther       Date:  2006-03-07       Impact factor: 4.030

9.  A versatile vector for gene and oligonucleotide transfer into cells in culture and in vivo: polyethylenimine.

Authors:  O Boussif; F Lezoualc'h; M A Zanta; M D Mergny; D Scherman; B Demeneix; J P Behr
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-01       Impact factor: 11.205

10.  Size, diffusibility and transfection performance of linear PEI/DNA complexes in the mouse central nervous system.

Authors:  D Goula; J S Remy; P Erbacher; M Wasowicz; G Levi; B Abdallah; B A Demeneix
Journal:  Gene Ther       Date:  1998-05       Impact factor: 5.250

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  61 in total

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Authors:  Olivia M Merkel; Meredith A Mintzer; Damiano Librizzi; Olga Samsonova; Tanja Dicke; Brian Sproat; Holger Garn; Peter J Barth; Eric E Simanek; Thomas Kissel
Journal:  Mol Pharm       Date:  2010-08-02       Impact factor: 4.939

2.  Controlled release of anti-inflammatory siRNA from biodegradable polymeric microparticles intended for intra-articular delivery to the temporomandibular joint.

Authors:  Paschalia M Mountziaris; David C Sing; Sue Anne Chew; Stephanie N Tzouanas; E Dennis Lehman; F Kurtis Kasper; Antonios G Mikos
Journal:  Pharm Res       Date:  2010-12-24       Impact factor: 4.200

Review 3.  Tumor-targeted delivery of siRNA by non-viral vector: safe and effective cancer therapy.

Authors:  Yunching Chen; Leaf Huang
Journal:  Expert Opin Drug Deliv       Date:  2008-12       Impact factor: 6.648

4.  An efficient and low immunostimulatory nanoparticle formulation for systemic siRNA delivery to the tumor.

Authors:  Sumio Chono; Shyh-Dar Li; Christine C Conwell; Leaf Huang
Journal:  J Control Release       Date:  2008-07-13       Impact factor: 9.776

5.  Multimeric small interfering ribonucleic acid for highly efficient sequence-specific gene silencing.

Authors:  Hyejung Mok; Soo Hyeon Lee; Ji Won Park; Tae Gwan Park
Journal:  Nat Mater       Date:  2010-01-24       Impact factor: 43.841

Review 6.  Structural diversity repertoire of gene silencing small interfering RNAs.

Authors:  Chan Il Chang; Helena Andrade Kim; Pooja Dua; Soyoun Kim; Chiang J Li; Dong-ki Lee
Journal:  Nucleic Acid Ther       Date:  2011-06       Impact factor: 5.486

Review 7.  RNA interference for glioblastoma therapy: Innovation ladder from the bench to clinical trials.

Authors:  Eunice L Lozada-Delgado; Nilmary Grafals-Ruiz; Pablo E Vivas-Mejía
Journal:  Life Sci       Date:  2017-08-31       Impact factor: 5.037

8.  Fab'-bearing siRNA TNFα-loaded nanoparticles targeted to colonic macrophages offer an effective therapy for experimental colitis.

Authors:  Hamed Laroui; Emilie Viennois; Bo Xiao; Brandon S B Canup; Duke Geem; Timothy L Denning; Didier Merlin
Journal:  J Control Release       Date:  2014-05-05       Impact factor: 9.776

Review 9.  Sequence-non-specific effects of RNA interference triggers and microRNA regulators.

Authors:  Marta Olejniczak; Paulina Galka; Wlodzimierz J Krzyzosiak
Journal:  Nucleic Acids Res       Date:  2009-10-20       Impact factor: 16.971

10.  Both helix topology and counterion distribution contribute to the more effective charge screening in dsRNA compared with dsDNA.

Authors:  Suzette A Pabit; Xiangyun Qiu; Jessica S Lamb; Li Li; Steve P Meisburger; Lois Pollack
Journal:  Nucleic Acids Res       Date:  2009-04-24       Impact factor: 16.971

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