Literature DB >> 17912687

The emerging field of chemical genetics: potential applications for pesticide discovery.

Terence A Walsh1.   

Abstract

The use of small molecules to probe biological systems, generally described as 'chemical genetics', has grown considerably in the past 7 years, especially in areas related to human biology and therapeutics. This review describes some aspects of chemical genetics technologies that can be usefully applied to pesticide target discovery and lead generation. The chemical genetics approach (consisting of a phenotype screen, a chemical library and a robust target identification methodology) is compared with conventional and target-based screening. The outcomes of a chemical genetics approach are novel protein targets coupled with in vivo-active chemical ligands. The 'chemistry-first' paradigm of the chemical genetics approach can circumvent some of the obstacles that have emerged for the exploitation of novel but chemically unvalidated targets identified from genetic or genomic screens. Some of the advantages and challenges in using chemical genetics approaches are reviewed. Copyright (c) 2007 Society of Chemical Industry.

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Year:  2007        PMID: 17912687     DOI: 10.1002/ps.1452

Source DB:  PubMed          Journal:  Pest Manag Sci        ISSN: 1526-498X            Impact factor:   4.845


  11 in total

Review 1.  Chemical and genetic exploration of jasmonate biosynthesis and signaling paths.

Authors:  Erich Kombrink
Journal:  Planta       Date:  2012-07-28       Impact factor: 4.116

2.  Discovery of a pyrazole derivative promoting angiogenesis through modulating reactive oxygen species and interferon-inducible protein 10 levels.

Authors:  Maohua Wang; Jingyong Zhang; Xuejun Wu; Xing Jin; Baoxiang Zhao; Lu Zhang; Hai Yuan; Hua Zhou; Binbin Gao; Wei Lv; Xiangqian Kong; Junying Miao
Journal:  Mol Biol Rep       Date:  2010-09-15       Impact factor: 2.316

3.  Optimizing the Use of a Liquid Handling Robot to Conduct a High Throughput Forward Chemical Genetics Screen of Arabidopsis thaliana.

Authors:  B K Amos; Victoria G Pook; Seth Debolt
Journal:  J Vis Exp       Date:  2018-04-30       Impact factor: 1.355

4.  The yeast three-hybrid system as an experimental platform to identify proteins interacting with small signaling molecules in plant cells: potential and limitations.

Authors:  Stéphanie Cottier; Timon Mönig; Zheming Wang; Jiří Svoboda; Wilhelm Boland; Markus Kaiser; Erich Kombrink
Journal:  Front Plant Sci       Date:  2011-12-26       Impact factor: 5.753

Review 5.  The yeast two-hybrid and related methods as powerful tools to study plant cell signalling.

Authors:  Elisa Ferro; Lorenza Trabalzini
Journal:  Plant Mol Biol       Date:  2013-06-21       Impact factor: 4.335

6.  Plant chemical biology: are we meeting the promise?

Authors:  Glenn R Hicks; Natasha V Raikhel
Journal:  Front Plant Sci       Date:  2014-09-08       Impact factor: 5.753

Review 7.  Considerations for designing chemical screening strategies in plant biology.

Authors:  Mario Serrano; Erich Kombrink; Christian Meesters
Journal:  Front Plant Sci       Date:  2015-04-08       Impact factor: 5.753

8.  Prediction of aptamer-protein interacting pairs using an ensemble classifier in combination with various protein sequence attributes.

Authors:  Lina Zhang; Chengjin Zhang; Rui Gao; Runtao Yang; Qing Song
Journal:  BMC Bioinformatics       Date:  2016-05-31       Impact factor: 3.169

9.  Diversity-Oriented Synthesis of Natural-Product-like Libraries Containing a 3-Methylbenzofuran Moiety for the Discovery of New Chemical Elicitors.

Authors:  Xingrui He; Xia Chen; Songbo Lin; Xiaochang Mo; Pengyong Zhou; Zhihao Zhang; Yaoyao Lu; Yu Yang; Haining Gu; Zhicai Shang; Yonggen Lou; Jun Wu
Journal:  ChemistryOpen       Date:  2016-12-09       Impact factor: 2.911

10.  Challenges and opportunities for small molecule aptamer development.

Authors:  Maureen McKeague; Maria C Derosa
Journal:  J Nucleic Acids       Date:  2012-10-24
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