Literature DB >> 17912421

A Monte Carlo-quantum mechanics study of the lowest n-pi* and pi-pi* states of uracil in water.

Valdemir Ludwig1, Kaline Coutinho, Sylvio Canuto.   

Abstract

The solvatochromic shifts of the n-pi(*) and pi-pi(*) states of uracil in water are analyzed using a combined and sequential Monte Carlo/quantum mechanics (MC/QM) approach. The role of the solute polarization and electronic delocalization into the solvent region are investigated. Electronic polarization of the solute is obtained using the HF/6-31G(d), the polarizable continuum model (PCM) and an iterative procedure using MP2/aug-cc-pVDZ in the MC/QM. The in-water dipole moment of uracil is obtained, respectively, as 5.12 D, 6.12 D and 7.01 +/- 0.05 D. This latter result, corresponding to an increase of 60% with respect to the gas phase value, is used in the classical potential of the MC simulation to obtain statistically uncorrelated configurations for subsequent QM calculations of the ultraviolet-visible absorption spectrum of uracil in water. QM calculations are performed at the time-dependent density-functional theory (TD-DFT) combined with the B3LYP and B3PW91 functionals, multiconfigurational (CASSCF) and the semi-empirical all-valence electron INDO/CIS methods. Using 60 solute-solvent configurations with the explicit inclusion of 200 water molecules the solvatochromic shift is obtained as a blue shift of 0.50 eV for the n-pi(*) state and a red shift of 0.19 eV for the pi-pi(*) state, in good agreement with experimentally-inferred values. These results are compared with TD-DFT results in conjunction with PCM approaches and the importance of solute polarization and wave function delocalization over the solvent region is discussed. Our results suggest that the elusive n-pi(*) state of uracil in water lies around 255 nm hidden by the intense and broad pi-pi(*) transition with a maximum at 260 nm, inverting the relative locations of these states compared to the gas phase. This is further supported by considering the in-water dipole moment changes upon excitation, as obtained from CASSCF calculations.

Entities:  

Year:  2007        PMID: 17912421     DOI: 10.1039/b704335j

Source DB:  PubMed          Journal:  Phys Chem Chem Phys        ISSN: 1463-9076            Impact factor:   3.676


  2 in total

1.  Theoretical study of the solvent effect on the aromaticity of benzene: a NICS analysis.

Authors:  Georgia M A Junqueira; Hélio F Dos Santos
Journal:  J Mol Model       Date:  2014-02-25       Impact factor: 1.810

2.  Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine.

Authors:  Javier Ortín-Fernández; Jesús González-Vázquez; Lara Martínez-Fernández; Inés Corral
Journal:  Molecules       Date:  2022-02-01       Impact factor: 4.411

  2 in total

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