Literature DB >> 17911300

Halalkalicoccus jeotgali sp. nov., a halophilic archaeon from shrimp jeotgal, a traditional Korean fermented seafood.

Seong Woon Roh1,2, Young-Do Nam1,2, Ho-Won Chang1, Youlboong Sung1, Kyoung-Ho Kim1, Hee-Mock Oh1, Jin-Woo Bae3,1,2.   

Abstract

A novel, extremely halophilic archaeon B3(T) was isolated from shrimp-salted seafood. Its morphology, physiology, biochemical features and 16S rRNA gene sequence were characterized. Strain B3(T) is non-motile, Gram-variable, requires at least 10 % (w/v) NaCl for growth and grows in the ranges of 21-50 degrees C and pH 6.5-9.0. The DNA G+C content of strain B3(T) was 63.2 mol%. Phylogenetic analysis based on the 16S rRNA gene sequences indicated that strain B3(T) belonged to the genus Halalkalicoccus and was phylogenetically closely related to the type strain Halalkalicoccus tibetensis (98.64 %). However, DNA-DNA hybridization experiments showed 7.0 % relatedness between strain B3(T) and a strain of a reference species of the genus Halalkalicoccus. Combined analysis of 16S rRNA gene sequences, DNA-DNA relatedness data, physiological and biochemical tests indicated that the genotypic and phenotypic characteristics differentiate strain B3(T) from other Halalkalicoccus species. On the basis of the evidence presented in this report, strain B3(T) represents a novel species of the genus Halalkalicoccus, for which the name Halalkalicoccus jeotgali. sp. nov. is proposed. The type strain is B3(T) (=KCTC 4019(T)=DSM 18796(T)=JCM 14584(T)=CECT 7217(T)).

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Year:  2007        PMID: 17911300     DOI: 10.1099/ijs.0.65121-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  9 in total

Review 1.  Temperature and pH optima of extremely halophilic archaea: a mini-review.

Authors:  Karen J Bowers; Juergen Wiegel
Journal:  Extremophiles       Date:  2011-02-22       Impact factor: 2.395

2.  Halomonas jeotgali sp. nov., a new moderate halophilic bacterium isolated from a traditional fermented seafood.

Authors:  Min-Soo Kim; Seong Woon Roh; Jin-Woo Bae
Journal:  J Microbiol       Date:  2010-06-23       Impact factor: 3.422

3.  Salinarchaeum laminariae gen. nov., sp. nov.: a new member of the family Halobacteriaceae isolated from salted brown alga Laminaria.

Authors:  Heng-Lin Cui; Xin Yang; Yun-Zhuang Mou
Journal:  Extremophiles       Date:  2011-09-08       Impact factor: 2.395

4.  Complete genome sequence of Halalkalicoccus jeotgali B3(T), an extremely halophilic archaeon.

Authors:  Seong Woon Roh; Young-Do Nam; Seong-Hyeuk Nam; Sang-Haeng Choi; Hong-Seog Park; Jin-Woo Bae
Journal:  J Bacteriol       Date:  2010-07-02       Impact factor: 3.490

5.  Halorussus rarus gen. nov., sp. nov., a new member of the family Halobacteriaceae isolated from a marine solar saltern.

Authors:  Heng-Lin Cui; Xia Gao; Xin Yang; Xue-Wei Xu
Journal:  Extremophiles       Date:  2010-09-08       Impact factor: 2.395

6.  Application of quantitative real-time PCR for enumeration of total bacterial, archaeal, and yeast populations in kimchi.

Authors:  Eun-Jin Park; Ho-Won Chang; Kyoung-Ho Kim; Young-Do Nam; Seong Woon Roh; Jin-Woo Bae
Journal:  J Microbiol       Date:  2010-02-04       Impact factor: 3.422

7.  Microbial biogeography of a university campus.

Authors:  Ashley A Ross; Josh D Neufeld
Journal:  Microbiome       Date:  2015-12-01       Impact factor: 14.650

8.  Occurrence of viable, red-pigmented haloarchaea in the plumage of captive flamingoes.

Authors:  Kyung June Yim; Joseph Kwon; In-Tae Cha; Kyung-Seo Oh; Hye Seon Song; Hae-Won Lee; Jin-Kyu Rhee; Eun-Ji Song; Jeong Rae Rho; Mi Lyu Seo; Jong-Soon Choi; Hak-Jong Choi; Sung-Jae Lee; Young-Do Nam; Seong Woon Roh
Journal:  Sci Rep       Date:  2015-11-10       Impact factor: 4.379

9.  Thermophilic and halophilic β-agarase from a halophilic archaeon Halococcus sp. 197A.

Authors:  Hiroaki Minegishi; Yasuhiro Shimane; Akinobu Echigo; Yukari Ohta; Yuji Hatada; Masahiro Kamekura; Tadashi Maruyama; Ron Usami
Journal:  Extremophiles       Date:  2013-08-15       Impact factor: 2.395

  9 in total

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