Literature DB >> 17910491

Experimental approach for assessing the outcome accuracy of antibody microarray experiments.

Qiang Gu1, Thamil Mani Sivanandam, Jessica Haymore.   

Abstract

An experimental strategy for quality control of antibody microarray analyses is proposed. The method utilizes proteins that are prepared for regular antibody microarray experiments. There is no need to use exogenous positive or negative reference markers and no need to determine the absolute concentration of each individual protein in the sample. Validation experiments support the basic principle of the proposed approach. This method can be a useful tool for assessing the outcome accuracy of microarray experiments.

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Year:  2007        PMID: 17910491      PMCID: PMC2291551          DOI: 10.1021/pr0703932

Source DB:  PubMed          Journal:  J Proteome Res        ISSN: 1535-3893            Impact factor:   4.466


  15 in total

1.  Toward optimized antibody microarrays: a comparison of current microarray support materials.

Authors:  Philipp Angenendt; Jörn Glökler; Derek Murphy; Hans Lehrach; Dolores J Cahill
Journal:  Anal Biochem       Date:  2002-10-15       Impact factor: 3.365

Review 2.  Progress in protein and antibody microarray technology.

Authors:  Philipp Angenendt
Journal:  Drug Discov Today       Date:  2005-04-01       Impact factor: 7.851

Review 3.  'The 39 steps' in gene expression profiling: critical issues and proposed best practices for microarray experiments.

Authors:  Sandrine Imbeaud; Charles Auffray
Journal:  Drug Discov Today       Date:  2005-09-01       Impact factor: 7.851

Review 4.  Multiplexed protein measurement: technologies and applications of protein and antibody arrays.

Authors:  Stephen F Kingsmore
Journal:  Nat Rev Drug Discov       Date:  2006-04       Impact factor: 84.694

5.  Novel algorithm for transcriptome analysis.

Authors:  Peter M Saama; Osman V Patel; Anilkumar Bettegowda; James J Ireland; George W Smith
Journal:  Physiol Genomics       Date:  2006-09-26       Impact factor: 3.107

Review 6.  Methods and applications of antibody microarrays in cancer research.

Authors:  Brian B Haab
Journal:  Proteomics       Date:  2003-11       Impact factor: 3.984

Review 7.  Protein microarrays: molecular profiling technologies for clinical specimens.

Authors:  Virginia Espina; Arpita I Mehta; Mary E Winters; Valerie Calvert; Julia Wulfkuhle; Emanuel F Petricoin; Lance A Liotta
Journal:  Proteomics       Date:  2003-11       Impact factor: 3.984

8.  Signal stability of Cy3 and Cy5 on antibody microarrays.

Authors:  Qiang Gu; Thamil Mani Sivanandam; Caroline Aehyun Kim
Journal:  Proteome Sci       Date:  2006-10-11       Impact factor: 2.480

9.  Within the fold: assessing differential expression measures and reproducibility in microarray assays.

Authors:  Ivana V Yang; Emily Chen; Jeremy P Hasseman; Wei Liang; Bryan C Frank; Shuibang Wang; Vasily Sharov; Alexander I Saeed; Joseph White; Jerry Li; Norman H Lee; Timothy J Yeatman; John Quackenbush
Journal:  Genome Biol       Date:  2002-10-24       Impact factor: 13.583

10.  Development and standardization of multiplexed antibody microarrays for use in quantitative proteomics.

Authors:  L T Perlee; S Lejnine; S F Kingsmore; J Christiansen; R Dondero; B Grimwade; M Mullenix; W Shao; M Sorette; V T Tchernev; D D Patel
Journal:  Proteome Sci       Date:  2004-12-15       Impact factor: 2.480

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